call peaks error - struct.error: unpack requires a string argument of length 4

[AYYYang]

Command line: callpeak -t filtered_H3K9ME3_MEIS1_NATIVE_A10.bam -f BAM -c input_Meis1_native_D02.bam -g mm --broad --broad-cutoff 0.1

ARGUMENTS LIST:

name = NA

format = BAM

ChIP-seq file = ['filtered_H3K9ME3_MEIS1_NATIVE_A10.bam']

control file = ['input_Meis1_native_D02.bam']

effective genome size = 1.87e+09

band width = 300

model fold = [5, 50]

qvalue cutoff for narrow/strong regions = 5.00e-02

qvalue cutoff for broad/weak regions = 1.00e-01

The maximum gap between significant sites is assigned as the read length/tag size.

The minimum length of peaks is assigned as the predicted fragment length "d".

Larger dataset will be scaled towards smaller dataset.

Range for calculating regional lambda is: 1000 bps and 10000 bps

Broad region calling is on

Paired-End mode is off

INFO @ Wed, 08 May 2019 17:48:44: #1 read tag files...
INFO @ Wed, 08 May 2019 17:48:44: #1 read treatment tags...
INFO @ Wed, 08 May 2019 17:48:48: 1000000
INFO @ Wed, 08 May 2019 17:48:52: 2000000
INFO @ Wed, 08 May 2019 17:48:55: 3000000
INFO @ Wed, 08 May 2019 17:48:59: 4000000
INFO @ Wed, 08 May 2019 17:49:03: 5000000
INFO @ Wed, 08 May 2019 17:49:07: 6000000
INFO @ Wed, 08 May 2019 17:49:11: 7000000
INFO @ Wed, 08 May 2019 17:49:14: 8000000
INFO @ Wed, 08 May 2019 17:49:18: 9000000
INFO @ Wed, 08 May 2019 17:49:22: 10000000
INFO @ Wed, 08 May 2019 17:49:26: 11000000
INFO @ Wed, 08 May 2019 17:49:30: 12000000
INFO @ Wed, 08 May 2019 17:49:34: 13000000
INFO @ Wed, 08 May 2019 17:49:38: 14000000
INFO @ Wed, 08 May 2019 17:49:42: 15000000
INFO @ Wed, 08 May 2019 17:49:46: 16000000
INFO @ Wed, 08 May 2019 17:49:49: 17000000
INFO @ Wed, 08 May 2019 17:49:53: 18000000
INFO @ Wed, 08 May 2019 17:49:57: 19000000
INFO @ Wed, 08 May 2019 17:50:01: 20000000
INFO @ Wed, 08 May 2019 17:50:05: 21000000
INFO @ Wed, 08 May 2019 17:50:08: 22000000
INFO @ Wed, 08 May 2019 17:50:12: 23000000
INFO @ Wed, 08 May 2019 17:50:16: 24000000
INFO @ Wed, 08 May 2019 17:50:20: 25000000
INFO @ Wed, 08 May 2019 17:50:24: 26000000
INFO @ Wed, 08 May 2019 17:50:28: 27000000
INFO @ Wed, 08 May 2019 17:50:31: 28000000
INFO @ Wed, 08 May 2019 17:50:35: 29000000
INFO @ Wed, 08 May 2019 17:50:39: 30000000
INFO @ Wed, 08 May 2019 17:50:43: 31000000
INFO @ Wed, 08 May 2019 17:50:47: 32000000
INFO @ Wed, 08 May 2019 17:50:51: 33000000
INFO @ Wed, 08 May 2019 17:50:55: 34000000
INFO @ Wed, 08 May 2019 17:50:59: 35000000
INFO @ Wed, 08 May 2019 17:51:03: 36000000
INFO @ Wed, 08 May 2019 17:51:08: 37000000
INFO @ Wed, 08 May 2019 17:51:12: 38000000
INFO @ Wed, 08 May 2019 17:51:16: 39000000
INFO @ Wed, 08 May 2019 17:51:20: 40000000
INFO @ Wed, 08 May 2019 17:51:24: 41000000
INFO @ Wed, 08 May 2019 17:51:29: 42000000
INFO @ Wed, 08 May 2019 17:51:33: 43000000
INFO @ Wed, 08 May 2019 17:51:37: 44000000
INFO @ Wed, 08 May 2019 17:51:41: 45000000
INFO @ Wed, 08 May 2019 17:51:45: 46000000
INFO @ Wed, 08 May 2019 17:51:49: 47000000
INFO @ Wed, 08 May 2019 17:51:53: 48000000
INFO @ Wed, 08 May 2019 17:51:57: 49000000
INFO @ Wed, 08 May 2019 17:52:01: 50000000
INFO @ Wed, 08 May 2019 17:52:06: 51000000
INFO @ Wed, 08 May 2019 17:52:10: 52000000
INFO @ Wed, 08 May 2019 17:52:14: 53000000
INFO @ Wed, 08 May 2019 17:52:18: 54000000
INFO @ Wed, 08 May 2019 17:52:22: 55000000
INFO @ Wed, 08 May 2019 17:52:26: 56000000
INFO @ Wed, 08 May 2019 17:52:30: 57000000
INFO @ Wed, 08 May 2019 17:52:34: 58000000
INFO @ Wed, 08 May 2019 17:52:38: 59000000
INFO @ Wed, 08 May 2019 17:52:42: 60000000
INFO @ Wed, 08 May 2019 17:52:46: 61000000
INFO @ Wed, 08 May 2019 17:52:49: 62000000
INFO @ Wed, 08 May 2019 17:52:53: 63000000
INFO @ Wed, 08 May 2019 17:52:57: 64000000
INFO @ Wed, 08 May 2019 17:53:01: 65000000
INFO @ Wed, 08 May 2019 17:53:05: 66000000
INFO @ Wed, 08 May 2019 17:53:09: 67000000
INFO @ Wed, 08 May 2019 17:53:13: 68000000
INFO @ Wed, 08 May 2019 17:53:17: 69000000
INFO @ Wed, 08 May 2019 17:53:20: 70000000
INFO @ Wed, 08 May 2019 17:53:24: 71000000
INFO @ Wed, 08 May 2019 17:53:28: 72000000
INFO @ Wed, 08 May 2019 17:53:32: 73000000
INFO @ Wed, 08 May 2019 17:53:36: 74000000
INFO @ Wed, 08 May 2019 17:53:40: 75000000
INFO @ Wed, 08 May 2019 17:53:43: 76000000
INFO @ Wed, 08 May 2019 17:53:47: 77000000
INFO @ Wed, 08 May 2019 17:53:51: 78000000
INFO @ Wed, 08 May 2019 17:53:55: 79000000
INFO @ Wed, 08 May 2019 17:53:59: 80000000
INFO @ Wed, 08 May 2019 17:54:03: #1.2 read input tags...
Traceback (most recent call last):
File "/usr/local/bin/macs2", line 622, in
main()
File "/usr/local/bin/macs2", line 57, in main
run( args )
File "/Library/Python/2.7/site-packages/MACS2/callpeak_cmd.py", line 73, in run
else: (treat, control) = load_tag_files_options (options)
File "/Library/Python/2.7/site-packages/MACS2/callpeak_cmd.py", line 411, in load_tag_files_options
control = options.parser(options.cfile[0], buffer_size=options.buffer_size).build_fwtrack()
File "MACS2/IO/Parser.pyx", line 876, in MACS2.IO.Parser.BAMParser.build_fwtrack (MACS2/IO/Parser.c:13658)
File "MACS2/IO/Parser.pyx", line 889, in MACS2.IO.Parser.BAMParser.build_fwtrack (MACS2/IO/Parser.c:13066)
File "MACS2/IO/Parser.pyx", line 862, in MACS2.IO.Parser.BAMParser.get_references (MACS2/IO/Parser.c:12582)
struct.error: unpack requires a string argument of length 4

[AYYYang]

I used samtools flagstat and samtools quickcheck to check my files, and they seem to be fine(quick check was silent and flagstat returned alignment stats), I was wondering what could be wrong?

[AYYYang]

Resolved at Biostars