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Cargo.toml
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[package]
name = "seq_io"
version = "0.3.3"
rust-version = "1.61.0"
edition = "2021"
authors = ["<markschl19@gmail.com>"]
description = "Fast FASTA and FASTQ readers"
license = "MIT"
repository = "https://github.com/markschl/seq_io"
documentation = "https://docs.rs/seq_io"
readme = "README.md"
keywords = ["bio", "fasta", "fastq", "parser"]
exclude = [
"bench_results/*",
]
[dependencies]
memchr = "2.7"
buffer-redux = { version = "~1.0.1", default-features = false }
scoped_threadpool = "0.1"
crossbeam-utils = "0.8"
serde = "1.0"
serde_derive = "1.0"
[dev-dependencies]
bio = { version = "2.0", default-features = false }
fastq = "0.6"
matches = "0.1.10"
lazy_static = "1.5"
rand = "0.9"
rand_distr = "0.5"
rand_isaac = "0.4"
criterion = { version = "0.5", default-features = false, features = ["csv_output"] }
[profile.bench]
lto = true
[[bench]]
name = "fasta"
harness = false
[[bench]]
name = "fastq"
harness = false