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schedule-day2.html
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<!--A Design by W3layouts
Author: W3layout
Author URL: http://w3layouts.com
License: Creative Commons Attribution 3.0 Unported
License URL: http://creativecommons.org/licenses/by/3.0/
-->
<!DOCTYPE HTML>
<html>
<head>
<title>Bioinformatics Bootcamp</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1">
<!-- google fonts-->
<link href='http://fonts.googleapis.com/css?family=Merriweather+Sans' rel='stylesheet' type='text/css'>
<!-- end google fonts -->
<link href="css/style.css" rel="stylesheet" type="text/css" media="all" />
</head>
<body>
<!-- start header -->
<div class="header_bg">
<div class="wrap">
<div class="wrapper">
<div class="header">
<h2 class="head">Bioinformatics Workshop @WashU</h2>
<div class="cssmenu">
<ul>
<li><a href="index.html">Home</a></li>
<li class="active"><a href="schedule.html">Schedule</a></li>
<li><a href="resources.html">Resources</a></li>
<li><a href="credits.html">Credits</a></li>
<div class="clear"></div>
</ul>
</div>
<div class="clear"></div>
</div>
</div>
</div>
</div>
<!-- start sub-header -->
<div class="header_sub_bg">
<div class="wrap">
<div class="wrapper">
<div class="hdr-nav">
<ul class="sub_nav">
<li><a href="schedule-day1.html">Day 1</a></li>
<li class="active"><a href="schedule-day2.html">Day 2</a></li>
<li><a href="schedule-day3.html">Day 3</a></li>
</ul>
</div>
<div class="clear"></div>
</div>
</div>
</div>
<!-- start main -->
<div class="wrap">
<div class="wrapper">
<div class="main">
<div class="content">
<table class="schedule">
<thead>
<tr>
<th>When</th>
<th>Lesson</th>
<th>Applied Exercise</th>
<th>Instructor</th>
</tr>
</thead>
<tbody>
<tr>
<td data-title="When">9:00-9:45</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python4_RepeatingYourself.ipynb" target="_blank">Python: Repeating yourself</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/translate.ipynb" target="_blank">Translate DNA to Protein</a><br />
(<a href="http://genomic.wustl.edu/bioinformatics/python/exercises/translate-solution.py" target="_blank">Solution</a>)
</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">9:45-10:30</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python5_MakingChoices.ipynb" target="_blank">Python: Making Choices</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/find_motifs.ipynb" target="_blank">Finding Motifs in DNA Sequence</a><br />
(<a href="http://genomic.wustl.edu/bioinformatics/python/exercises/find_motifs-solution.py" target="_blank">Solution</a>)
</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">10:30-11:15</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python6_WritingFunctions.ipynb" target="_blank">Python: Writing Your Own Functions</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/motif_module.ipynb" target="_blank">Write Motif Finding Module</a><br />
(<a href="http://genomic.wustl.edu/bioinformatics/python/exercises/motifs.py" target="_blank">Solution</a>)
</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">11:15-11:30</td>
<td data-title="What">BREAK</td>
<td data-title="Lessons">--</td>
<td data-title="Who">--</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">11:30-12:15</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python7_FileIO.ipynb" target="_blank">Python: Reading and Writing Files</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/process_seq_file.ipynb" target="_blank">Finding DNA Motifs in Sequence File</a><br />
(<a href="http://genomic.wustl.edu/bioinformatics/python/exercises/find_motifs_in_file-solution.py" target="_blank">Solution</a>)
</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">12:15-12:55</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/running_software.ipynb" target="_blank">Running Bioinformatics Software</a><br />
<!--
(<a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/running_software_solution.ipynb" target="_blank">Solution</a>)
-->
</td>
<td data-title="Lessons">--</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">12:55-1:00</td>
<td data-title="What"><a href="https://docs.google.com/forms/d/1Fzj9P8z2LNj5xUS7LezUf_QY3D5B49AyB9T79DRABr8/viewform" target="_blank">Survey</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">--</td>
</tr>
</tbody>
</table>
</div>
</div>
</div>
</body>
</html>