App: Can't root individual tree on dropped tip

[ms609]

• Create consensus tree and drop a tip
• go onto Characters on Trees display and try to root that tree on the dropped tip
• Return to consensus tree view and see an error message?

[ms609]

629e15d

Warning: Error in RoguePlot: unused arguments (edgeLength = 1, outgroupTips = r$outgroup, tip.color = TipCols()[intersect(consTrees[[1]]$tip.label, kept)])
  230: ConsensusPlot [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#1980]
  229: MainPlot [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#2185]
  228: <reactive:ReactiveMainPlot> [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#2199]
  226: .func
  223: contextFunc
  222: env$runWith
  215: ctx$run
  214: self$.updateValue
  212: ReactiveMainPlot
  211: renderPlot
  209: func
  169: drawPlot
  155: <reactive:plotObj>
  139: drawReactive
  126: renderFunc
  125: valueFunc
  112: valueFunc
   97: func
   95: f
   94: Reduce
   85: do
   84: hybrid_chain
   83: output$treePlot
    2: shiny::runApp
    1: EasyTrees [C:/Users/pjjg18/GitHub/TreeSearch/R/MaximizeParsimony.R#917]
Warning: Error in RoguePlot: unused argument (plot = FALSE)
  98: renderUI [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#1532]
  97: func
  84: renderFunc
  83: output$branchLegend
   2: shiny::runApp
   1: EasyTrees [C:/Users/pjjg18/GitHub/TreeSearch/R/MaximizeParsimony.R#917]
Warning: Error in RoguePlot: unused argument (plot = FALSE)
  98: renderUI [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#1532]
  97: func
  84: renderFunc
  83: output$branchLegend
   2: shiny::runApp
   1: EasyTrees [C:/Users/pjjg18/GitHub/TreeSearch/R/MaximizeParsimony.R#917]
Warning: Error in RoguePlot: unused arguments (edgeLength = 1, outgroupTips = r$outgroup, tip.color = TipCols()[intersect(consTrees[[1]]$tip.label, kept)])
  230: ConsensusPlot [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#1980]
  229: MainPlot [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#2185]
  228: <reactive:ReactiveMainPlot> [C:\Users\pjjg18\AppData\Local\R\win-library\4.4\TreeSearch\Parsimony/app.R#2199]
  226: .func
  223: contextFunc
  222: env$runWith
  215: ctx$run
  214: self$.updateValue
  212: ReactiveMainPlot
  211: renderPlot
  209: func
  169: drawPlot
  155: <reactive:plotObj>
  139: drawReactive
  126: renderFunc
  125: valueFunc
  112: valueFunc
   97: func
   95: f
   94: Reduce
   85: do
   84: hybrid_chain
   83: output$treePlot
    2: shiny::runApp
    1: EasyTrees [C:/Users/pjjg18/GitHub/TreeSearch/R/MaximizeParsimony.R#917]