From 0d1d0b3d57652e0c5b2a9eb2297064d8c75b3ef6 Mon Sep 17 00:00:00 2001 From: Anne Marie Noronha Date: Mon, 5 Jun 2023 16:30:16 -0400 Subject: [PATCH] Remove nf-core diff patch for umitools/dedup module --- modules.json | 3 +-- modules/nf-core/umitools/dedup/main.nf | 2 +- modules/nf-core/umitools/dedup/umitools-dedup.diff | 13 ------------- 3 files changed, 2 insertions(+), 16 deletions(-) delete mode 100644 modules/nf-core/umitools/dedup/umitools-dedup.diff diff --git a/modules.json b/modules.json index 8887c81..f7321b0 100644 --- a/modules.json +++ b/modules.json @@ -139,8 +139,7 @@ "umitools/dedup": { "branch": "master", "git_sha": "6d9c7e43404e20a97d2f6f88548456afe78282e6", - "installed_by": ["modules"], - "patch": "modules/nf-core/umitools/dedup/umitools-dedup.diff" + "installed_by": ["modules"] }, "umitools/extract": { "branch": "master", diff --git a/modules/nf-core/umitools/dedup/main.nf b/modules/nf-core/umitools/dedup/main.nf index 566e38f..68fc9b9 100644 --- a/modules/nf-core/umitools/dedup/main.nf +++ b/modules/nf-core/umitools/dedup/main.nf @@ -1,6 +1,6 @@ process UMITOOLS_DEDUP { tag "$meta.id" - label "process_low" + label "process_single" conda "bioconda::umi_tools=1.1.4" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? diff --git a/modules/nf-core/umitools/dedup/umitools-dedup.diff b/modules/nf-core/umitools/dedup/umitools-dedup.diff deleted file mode 100644 index 6dc63ce..0000000 --- a/modules/nf-core/umitools/dedup/umitools-dedup.diff +++ /dev/null @@ -1,13 +0,0 @@ -Changes in module 'nf-core/umitools/dedup' ---- modules/nf-core/umitools/dedup/main.nf -+++ modules/nf-core/umitools/dedup/main.nf -@@ -1,6 +1,6 @@ - process UMITOOLS_DEDUP { - tag "$meta.id" -- label "process_single" -+ label "process_low" - - conda "bioconda::umi_tools=1.1.4" - container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - -************************************************************