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DESCRIPTION
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Package: skitools
Title: Various mskilab R utilties
Version: 0.0.0.9000
Maintainer: Marcin Imielinski <mimielinski@nygenome.org>
Author: Marcin Imielinski <mimielinski@nygenome.org>
Authors@R: person("Marcin", "Imielinski", email = "mimielinski@nygenome.org", role = c("aut", "cre"))
Description: R miscellaneous utilities for basic data manipulation, debugging,
viz, lsf management, and common mskilab tasks.
Imports:
gplots,
hwriter,
S4Vectors,
BiocGenerics,
RColorBrewer,
methods,
gUtils,
reshape2,
IRanges,
tools,
Biostrings,
DT,
GenomeInfoDb
Depends:
R (>= 3.1.0),
GenomicRanges,
ComplexHeatmap,
VariantAnnotation,
htmlwidgets,
devtools,
stringr,
plotly,
ggplot2,
data.table,
reshape2,
igraph
Remotes:
github::mskilab/gUtils,
github::mskilab/gChain,
github::mskilab/gTrack
Suggests:
testthat,
parallel,
BSgenome.Hsapiens.UCSC.hg19
License: MIT
LazyData: true
RoxygenNote: 7.3.2
Encoding: UTF-8