index.md

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home	Phenotypes

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Welcome to the HDR UK CALIBER Phenotype Portal

A comprehensive, open-access resource providing the research community with information, tools and phenotyping algorithms for UK electronic health records:

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phenotyping algorithms

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codelists

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medical ontology terms

10+

data sources

100+

research papers

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What is a phenotyping algorithm?

Phenotyping algorithms are complex computer programs that extract useful information from electronic health records so they can be used for health research.

What is the HDR UK Phenotype Portal?

The HDR UK Phenotype Portal is a a national platform for dissemination of citable algorithms (incl. validations) and tools which will reduce duplication of effort and improve research reproducibility. More information can be found on the HDR website.

How to contribute?

To submit an EHR phenotyping algorithm to the Phenotype Portal, read our documentation pages. If you want to provide feedback, or ask questions, contact the team!

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## Disease or syndrome {: .table-title } {% assign disease_phenotypes = site.phenotypes | where: "type", "Disease or Syndrome" | sort: "name" %}

| Phenotype | Data Sources | |-----------|--------------|{% for phenotype in disease_phenotypes %} [{{ phenotype.name }}]({{ phenotype.url }}) | {{ phenotype.data_sources | join: ", "}} |{% endfor %}

View all diseases and syndromes{: .btn} {: .btn-p}

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## Biomarkers {: .table-title } {% assign biomarker_phenotypes = site.phenotypes | where: "type", "Biomarker" | sort: "name" %} | Phenotype | Data Sources | |-----------|--------------|{% for phenotype in biomarker_phenotypes %} | [{{ phenotype.name }}]({{ phenotype.url }}) | {{ phenotype.data_sources | join: ", "}} |{% endfor %}

View all biomarkers{: .btn} {: .btn-p}

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## Lifestyle Risk factors {: .table-title } {% assign lifestyle_phenotypes = site.phenotypes | where: "type", "Lifestyle Risk Factor" | sort: "name" %} | Phenotype | Data Sources | |-----------|--------------|{% for phenotype in lifestyle_phenotypes %} | [{{ phenotype.name }}]({{ phenotype.url }}) | {{ phenotype.data_sources | join: ", "}} |{% endfor %}

View all lifestyle risk factors{: .btn} {: .btn-p}

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