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CHANGELOG.md

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nf-core/drugresponseeval: Changelog

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

v1.0dev - [date]

Initial release of nf-core/drugresponseeval, created with the nf-core template.

Added

  • Updated to the new template
  • Added tests that run with docker, singularity, apptainer, and conda
  • Added the docker container and the conda env.yml in the nextflow.config. We just need one container for all processes as this pipeline automates the PyPI package drevalpy.
  • Added usage and output documentation.
  • Added CurveCurator to preprocess curves of custom datasets

Fixed

  • Fixed linting issues
  • Fixed bugs with path_data: can now be handled as absolute and relative paths

Dependencies

Deprecated