From e28367608445016885ebcb1a9f00b262ec7dd778 Mon Sep 17 00:00:00 2001 From: Raquel Manzano <36073691+RaqManzano@users.noreply.github.com> Date: Thu, 15 Feb 2024 13:59:15 +0000 Subject: [PATCH 1/4] Update README.md Fixed GitHub Actions CI and Linting badges links. --- nf_core/pipeline-template/README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nf_core/pipeline-template/README.md b/nf_core/pipeline-template/README.md index 5160ccb04d..72b80e2035 100644 --- a/nf_core/pipeline-template/README.md +++ b/nf_core/pipeline-template/README.md @@ -8,8 +8,8 @@ {% endif -%} {% if github_badges -%} -[![GitHub Actions CI Status](https://github.com/{{ name }}/workflows/nf-core%20CI/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+CI%22) -[![GitHub Actions Linting Status](https://github.com/{{ name }}/workflows/nf-core%20linting/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+linting%22){% endif -%} +[![GitHub Actions CI Status](https://github.com/{{ name }}/actions/workflows/ci.yml/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+CI%22) +[![GitHub Actions Linting Status](https://github.com/{{ name }}/actions/workflows/linting_comment.yml/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+linting%22){% endif -%} {% if branded -%}[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/{{ short_name }}/results){% endif -%} {%- if github_badges -%} [![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX) From d214ed619aa5f158c66f77696faeff4ee11d5eb9 Mon Sep 17 00:00:00 2001 From: Phil Ewels Date: Thu, 15 Feb 2024 15:23:24 +0100 Subject: [PATCH 2/4] Fix badge links --- nf_core/pipeline-template/README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nf_core/pipeline-template/README.md b/nf_core/pipeline-template/README.md index 14ca64b9a7..037d3fd81a 100644 --- a/nf_core/pipeline-template/README.md +++ b/nf_core/pipeline-template/README.md @@ -9,8 +9,8 @@ {% endif -%} {% if github_badges -%} -[![GitHub Actions CI Status](https://github.com/{{ name }}/actions/workflows/ci.yml/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+CI%22) -[![GitHub Actions Linting Status](https://github.com/{{ name }}/actions/workflows/linting_comment.yml/badge.svg)](https://github.com/{{ name }}/actions?query=workflow%3A%22nf-core+linting%22){% endif -%} +[![GitHub Actions CI Status](https://github.com/{{ name }}/actions/workflows/ci.yml/badge.svg)](https://github.com/{{ name }}/actions/workflows/ci.yml) +[![GitHub Actions Linting Status](https://github.com/{{ name }}/actions/workflows/linting.yml/badge.svg)](https://github.com/{{ name }}/actions/workflows/linting.yml){% endif -%} {% if branded -%}[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/{{ short_name }}/results){% endif -%} {%- if github_badges -%} [![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX) From a32f6d3f2e8c36282afd4e9ea5bca9c0c17b75be Mon Sep 17 00:00:00 2001 From: nf-core-bot Date: Thu, 15 Feb 2024 14:25:05 +0000 Subject: [PATCH 3/4] [automated] Update CHANGELOG.md --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 86a879a23e..e055d41e2d 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,6 +12,7 @@ - make creat-lint-wf composable ([#2733](https://github.com/nf-core/tools/pull/2733)) - add looser comparison when pipeline logos ([#2744](https://github.com/nf-core/tools/pull/2744)) +- Template: Fix GitHub Actions CI and badges links ([#2757](https://github.com/nf-core/tools/pull/2757)) ### Modules From 1a57b3a0122d88a71d85527774cabc3c21e8ce0e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Matthias=20H=C3=B6rtenhuber?= Date: Thu, 15 Feb 2024 14:36:18 +0000 Subject: [PATCH 4/4] fix changelog --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index e055d41e2d..2976528f14 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -7,12 +7,12 @@ - Add empty line in README.md to fix badges. ([#2729](https://github.com/nf-core/tools/pull/2729)) - Replace automatic branch detection in `nf-core download` CI test with hardcoded `dev` and input. ([#2727](https://github.com/nf-core/tools/pull/2727)) - Add Github Action to automatically cleanup ubuntu-latest runners to fix runner running out of diskspace errors([#2755](https://github.com/nf-core/tools/issues/2755)) +- Fix GitHub Actions CI and Linting badges links ([#2757](https://github.com/nf-core/tools/pull/2757)) ### Linting - make creat-lint-wf composable ([#2733](https://github.com/nf-core/tools/pull/2733)) - add looser comparison when pipeline logos ([#2744](https://github.com/nf-core/tools/pull/2744)) -- Template: Fix GitHub Actions CI and badges links ([#2757](https://github.com/nf-core/tools/pull/2757)) ### Modules