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My idea is to integrate this in the LOGO splitter:
We already have a copy of the fieldmap (I'd say the coefficients of its B-Spline representation) in the DWI object.
We already have a list of realigning affines (which are identity in the first step).
We then project the fieldmap coefficients into the left-out gradient through the corresponding affine.
We interpolate the fieldmap at every voxel from the coefficients.
We resample the left-out gradient with the projected fieldmap (I think nitransforms should be able to do this already).
We return a left-out gradient after unwarping!
Therefore, this simplifies something that otherwise would be really convoluted: it's not just that the fieldmap is included in the process, it is that we will be able to account for susceptibility-distortions in the moved space of each volume (which makes the wapring a little bit different for each orientation)
The text was updated successfully, but these errors were encountered:
Currently, we just have a placeholder.
My idea is to integrate this in the LOGO splitter:
Therefore, this simplifies something that otherwise would be really convoluted: it's not just that the fieldmap is included in the process, it is that we will be able to account for susceptibility-distortions in the moved space of each volume (which makes the wapring a little bit different for each orientation)
The text was updated successfully, but these errors were encountered: