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<!DOCTYPE HTML>
<html>
<head>
<title>Bioinformatics Bootcamp</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1">
<!-- google fonts-->
<link href='http://fonts.googleapis.com/css?family=Merriweather+Sans' rel='stylesheet' type='text/css'>
<!-- end google fonts -->
<link href="css/style.css" rel="stylesheet" type="text/css" media="all" />
</head>
<body>
<!-- start header -->
<div class="header_bg">
<div class="wrap">
<div class="wrapper">
<div class="header">
<h2 class="head">Bioinformatics Workshop @WashU</h2>
<div class="cssmenu">
<ul>
<li><a href="index.html">Home</a></li>
<li><a href="schedule-day1.html">Schedule</a></li>
<li class="active"><a href="resources.html">Resources</a></li>
<li><a href="credits.html">Credits</a></li>
<div class="clear"></div>
</ul>
</div>
<div class="clear"></div>
</div>
</div>
</div>
</div>
<!-- start main -->
<div class="wrap">
<div class="wrapper">
<div class="main">
<div class="content">
<h2 class="style list">Cheat Sheets</h2>
<h3 class="style list">Shell</h3>
<ul>
<li><a href="http://www.cheat-sheets.org/saved-copy/fwunixref.pdf" target="_blank">Unix Command Reference</a></li>
<li><a href="http://sites.tufts.edu/cbi/files/2013/01/linux_cheat_sheet.pdf" target="_blank">Unix Cheat Sheet</a></li>
</ul><br /><br />
<h3 class="style list">Python</h3>
<ul>
<li><a href="http://www.cogsci.rpi.edu/~destem/gamedev/python.pdf" target="_blank">Python Cheat Sheet</a></li>
<li><a href="http://ptgmedia.pearsoncmg.com/imprint_downloads/informit/promotions/python/python2python3.pdf" target="_blank">Python2 vs. Python3</a></li>
<li>From <a href="https://books.google.com/books?id=gz2KAMBybxwC&pg=PA20&lpg=PA20&dq=python+representative+error+message&source=bl&ots=nwsvizgkav&sig=FNCS2Edz9SY6GsI-hq739YhBz68&hl=en&sa=X&ei=osimVIfIMsKxyASxooGoAw&ved=0CDYQ6AEwBA#v=onepage&q=python%20representative%20error%20message&f=false">Bioinformatics Program Using Python </a>:<br /> <img src="tracebacks.png" width="500" /></li>
</ul>
<h2 class="style list">Documentation</h2>
<ul>
<li><a href="https://docs.python.org/3/" target="_blank">Python3</a></li>
<li><a href="http://docs.scipy.org/doc/scipy-0.14.0/reference/" target="_blank">SciPy</a></li>
<li><a href="http://docs.scipy.org/doc/numpy/" target="_blank">NumPy</a></li>
<li><a href="http://matplotlib.org/contents.html" target="_blank">Matplotlib</a></li>
</ul>
<h2 class="style list">Online Resources</h2>
<ul>
<li><a href="http://pythonforbiologists.com/index.php/introduction-to-python-for-biologists/" target="_blank">Python for Biologists</a>: Website and textbooks for learning Python for Biologists</li>
<li><a href="http://www.codecademy.com/" target="_blank">Codecademy</a>: Learn to code interactively, for free.</li>
</ul>
<ul>
<li><a href="http://rosalind.info/problems/locations/" target="_blank">Rosalind</a>: Rosalind is a platform for learning bioinformatics and programming through problem solving.</li>
<li><a href="http://www.labri.fr/perso/nrougier/teaching/matplotlib/" target="_blank">Useful Matplotlib Tutorial</a></li>
<li><a href="http://matplotlib.org/gallery.html" target="_blank">Matplotlib Gallery</a></li>
<li><a href="http://biopython.org/wiki/Main_Page" target="_blank">Biopython</a>: Biopython is a set of freely available tools for biological computation written in Python by an international team of developers.</li>
<li><a href="http://www.programmingforbiologists.org/" target="_blank">Programming for Biologists</a>: Course material for learning python for biologists</li>
</ul>
<h2 class="style list">Suggested Textbooks</h2>
<ul>
<li><a href="http://www.amazon.com/gp/product/059615450X/ref=s9_simh_se_p14_d0_i3?pf_rd_m=ATVPDKIKX0DER&pf_rd_s=search-desktop-advertising-no-results-center-1&pf_rd_r=0573JK4JPSSZHAJZCV83&pf_rd_t=301&pf_rd_p=1912906142&pf_rd_i=ioinformatics%20Programmin%5C%20g%20Using%20Python" target="_blank">Bioinformatics Programming Using Python</a></li>
<li><a href="http://www.amazon.com/Python-Biologists-complete-programming-beginners/dp/1492346136" target="_blank">Python for Biologists</a></li>
<li><a href="http://www.amazon.com/gp/product/144933072X/ref=as_li_qf_sp_asin_il_tl?ie=UTF8&camp=1789&creative=9325&creativeASIN=144933072X&linkCode=as2&tag=greenteapre01-20" target="_blank">Think Python</a></li>
<li><a href="http://www.amazon.com/Python-Data-Analysis-Wrangling-IPython/dp/1449319793/ref=pd_bxgy_b_img_z" target="_blank">Python for Data Analysis</a></li>
</ul>
</div>
</div>
</div>
</body>
</html>