forked from mollygibson/bioinformatics_wkshp_washu
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathschedule-day1.html
executable file
·155 lines (151 loc) · 6.61 KB
/
schedule-day1.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
<!DOCTYPE HTML>
<html>
<head>
<title>Bioinformatics Bootcamp</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1">
<!-- google fonts-->
<link href='http://fonts.googleapis.com/css?family=Merriweather+Sans' rel='stylesheet' type='text/css'>
<!-- end google fonts -->
<link href="css/style.css" rel="stylesheet" type="text/css" media="all" />
</head>
<body>
<!-- start header -->
<div class="header_bg">
<div class="wrap">
<div class="wrapper">
<div class="header">
<h2 class="head">Bioinformatics Workshop @WashU</h2>
<div class="cssmenu">
<ul>
<li><a href="index.html">Home</a></li>
<li class="active"><a href="schedule.html">Schedule</a></li>
<li><a href="resources.html">Resources</a></li>
<li><a href="credits.html">Credits</a></li>
<div class="clear"></div>
</ul>
</div>
<div class="clear"></div>
</div>
</div>
</div>
</div>
<!-- start sub-header -->
<div class="header_sub_bg">
<div class="wrap">
<div class="wrapper">
<div class="hdr-nav">
<ul class="sub_nav">
<li class="active"><a href="schedule-day1.html">Day 1</a></li>
<li><a href="schedule-day2.html">Day 2</a></li>
<li><a href="schedule-day3.html">Day 3</a></li>
</ul>
</div>
<div class="clear"></div>
</div>
</div>
</div>
<!-- start main -->
<div class="wrap">
<div class="wrapper">
<div class="main">
<div class="content">
<table>
<thead>
<tr>
<th>When</th>
<th>What</th>
<th>Applied Exercies</th>
<th>Instructor</th>
</tr>
</thead>
<tbody>
<tr>
<td data-title="When">9:00-9:10</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/introduction.ipynb" target="_blank">Welcome and Introduction</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">9:10-9:30</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/shell/setup.ipynb" target="_blank">Shell: Setup and SSH</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">9:30-10:00</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/shell/shell-intro1.ipynb" target="_blank">Shell: Unix files and file structures</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">10:00-10:30</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/shell/shell-finding_things.ipynb" target="_blank">Shell: Finding Things</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">10:30-11:00</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/shell/shell-piping.ipynb" target="_blank">Shell: Piping and Redirect</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Nicole</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">11:00-11:15</td>
<td data-title="What">BREAK</td>
<td data-title="Lessons">--</td>
<td data-title="Who">---</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">11:15-12:00</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python1_Variables-and-Functions.ipynb" target="_blank">Python: Variables & Functions</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/orf_len.ipynb" target="_blank">Calculate ORF Length</a><br />
(<a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/orf_len-solution.ipynb" target="_blank">Solution</a>)
</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">12:00-12:30</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python2_DataStructures.ipynb" target="_blank">Python: Collections of Things</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">12:30-12:55</td>
<td data-title="What"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/lessons/Python3_Scripts.ipynb" target="_blank">Python: Your First Script</a></td>
<td data-title="Lessons"><a href="http://nbviewer.ipython.org/github/mollygibson/bioinformatics_wkshp_washu/blob/master/python/exercises/calculate_gc_content.ipynb" target="_blank">Calculate GC Content</a><br />
(<a href="http://genomic.wustl.edu/bioinformatics/python/exercises/calculate_gc_content-solution.py" target="_blank">Solution</a>)
</td>
<td data-title="Who">Molly</td>
</tr>
</tbody>
<tbody>
<tr>
<td data-title="When">12:55-1:00</td>
<td data-title="What"><a href="https://docs.google.com/forms/d/10HK66FsDWcV_wA1m7M8LUWXsb5730YEhckhuMY72wZ8/viewform" target="_blank">Survey</a></td>
<td data-title="Lessons">--</td>
<td data-title="Who">--</td>
</tr>
</tbody>
</table>
</div>
</div>
</div>
</body>
</html>