Tutorial

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• Preliminars
• Download data sources
• Building CellBase
• Installing the database
• Using REST web services

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Preliminars

CellBase comes with a Python program to download all the data sources required for building the databases and with a Java command line interface (CLI) for building the database, you will need at least Java 7. After the installation you should have a directory with this structure: ... ...

Download data sources

You can find the Python script at...

Building CellBase

Once we have downloaded the data we can build the Data Models for MongoDB by executing:

Tu run the Java CLI you must execute:

java -jar lib/cellbase-build-3.1.0.jar --build

Installing the database

Using REST web services