Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

findStoichConsistentSubset error in minCardinalityConservationRelaxationVector #2337

Open
3 tasks done
Gpreciat opened this issue Oct 3, 2024 · 0 comments
Open
3 tasks done

Comments

@Gpreciat
Copy link
Contributor

Gpreciat commented Oct 3, 2024

Error using optimizeCardinality
mosek not working with optCard -TODO debug with testOptimizeCbModel

Error in minCardinalityConservationRelaxationVector (line 112)
solutionRelax = optimizeCardinality(cardProblem,param);

Error in findStoichConsistentSubset (line 324)
[relaxRxnBool,solutionRelax] = minCardinalityConservationRelaxationVector(model.S(boolMet,boolRxn),minCardRelaxParams,printLevel-1);

Error in XomicsToModel (line 796)
[~, ~, ~, ~, ~, ~, model, stoichConsistModel] = findStoichConsistentSubset(model, ...

Error in XomicsToMultipleModels (line 380)
[omicsModel, modelGenerationReport] = XomicsToModel(genericModel, specificData, param);

Error in driver_createMultipleIDNModels (line 163)
directoriesWithModels = XomicsToMultipleModels(modelGenerationConditions, param);

I hereby confirm that I have:

  • Tried to solve the issue on my own
  • Retried to run my code with the latest version of The COBRA Toolbox
  • Checked that a similar issue has not already been opened

(Note: You may replace [ ] with [X] to check the box)

# for free to join this conversation on GitHub. Already have an account? # to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant