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Equilibration times and samplig #591

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lilyminium opened this issue Dec 16, 2024 · 1 comment
Open

Equilibration times and samplig #591

lilyminium opened this issue Dec 16, 2024 · 1 comment
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@lilyminium
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From #587 and existing Slack discussion -- this issue is to discuss issues with sampling and equilibration times. The current Evaluator defaults (200 ps equilibration, 2 ns production) may not work well for some of the properties we fit to, such as triethanolamine + water which appears to equilibrate very slowly. The ConditionalGroup protocol is intended to iterate until a target uncertainty is reached, but this isn't sufficient to be catching systems such as triethanolamine.

cc @mrshirts @barmoral

@mrshirts
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Note there are two possible reasons for the slow equilibration - a very slow-moving liquid, and a failure in the box build making the initial volume too high. @barmoral is checking these. Regardless, we may need some method for checking. Enthalpy equilibration may also slightly lag volume equilibration.

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