{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"nf-ncov-voc","owner":"CanCOGeN-V","isFork":true,"description":"A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (<a href=\"https://github.com/cidgoh/COVID-MVP\">https://github.com/cidgoh/COVID-MVP</a>) which can be used to visualize the mutation profiles and functional annotations.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":5,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-19T19:09:07.839Z"}},{"type":"Public","name":"covid-19-signal","owner":"CanCOGeN-V","isFork":true,"description":"Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":25,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-30T21:26:24.003Z"}},{"type":"Public","name":"COVID-MVP","owner":"CanCOGeN-V","isFork":true,"description":"COVID-MVP is an interactive heatmap based visualization tool for SARS-CoV-2. It tracks mutations along with their functional impact and prevalence in Variants of Concern and Interest in near-real time. COVID-MVP is developed in collaboration with nf-ncov-voc <a href=\"https://github.com/cidgoh/nf-ncov-voc\">https://github.com/cidgoh/nf-ncov-voc</a> as back-end genomics workflow.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-22T02:07:26.582Z"}},{"type":"Public","name":"covseq_McGill","owner":"CanCOGeN-V","isFork":true,"description":"McGill SARS-CoV2 Documentation","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-27T20:09:06.820Z"}},{"type":"Public","name":"irida-plugin-viral-amplicon-consensus-variants","owner":"CanCOGeN-V","isFork":false,"description":"Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes","allTopics":["microbial-genomics","variant-calling","viral-genomics","sequence-analysis"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-21T01:36:10.369Z"}},{"type":"Public","name":"covizu","owner":"CanCOGeN-V","isFork":true,"description":"Rapid analysis and visualization of coronavirus genome variation","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":20,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-12T18:47:41.279Z"}},{"type":"Public","name":"ncov-tools","owner":"CanCOGeN-V","isFork":true,"description":"Small collection of tools for performing quality control on coronavirus sequencing data and genomes","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":16,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-12T16:15:56.439Z"}}],"repositoryCount":7,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"CanCOGeN-V repositories"}