Repositories list

• Cotton_graph_genome

  Public
  parallel selection between diploid and tetraploid

  Perl

  •2•1•0•0•Updated Sep 26, 2024Sep 26, 2024

• GGCW

  Public
  Graph genome comparison workflow

  Python

  •

  Apache License 2.0

  •0•2•0•0•Updated Feb 24, 2024Feb 24, 2024

• zenodo-upload

  Public
  upload big files to Zenodo using cURL, jq and bash

  Shell

  •

  MIT License

  •39•0•0•0•Updated Dec 7, 2023Dec 7, 2023

• PythonTutorial

  Public
  Tutorial data sets

  0•0•0•0•Updated Jun 8, 2023Jun 8, 2023

• CSS

  Public
  conserved splicing site between genomes

  Python

  •1•0•0•0•Updated Nov 10, 2022Nov 10, 2022

• utils

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 11, 2022Aug 11, 2022

• lab_web_back_end

  Public
  back end of lab web server

  JavaScript

  •0•0•0•0•Updated Jul 6, 2022Jul 6, 2022

• lab-web-server

  Public
  web front and Vue@3.0 based

  vue

  Vue

  •

  Apache License 2.0

  •0•0•0•1•Updated Jul 6, 2022Jul 6, 2022

• BarcodeParse

  Public
  Parsing the barcode sequences in CRISPR-Case9 system using Next-generation sequencing

  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 6, 2021Aug 6, 2021

• ConInterval

  Public
  Scan conserved intervals based on the collinearity of genes.

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 15, 2021Jul 15, 2021

• Homoeolog_coordinate

  Public
  Align the homoeolog gene Coordinate

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 13, 2021Jul 13, 2021

• KAD_Genomes

  Public
  Source data and codes in the analysis of genome evolution and 3D genome architecture for Gossypium rotundifolium (K2), G. arboreum (A2) and G. raimondii (D5) species.

  R

  •1•3•0•0•Updated Mar 17, 2021Mar 17, 2021