Repositories list

• dqb0301

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Aug 11, 2023Aug 11, 2023

• hibagPred

  Public
  R

  •0•0•0•1•Updated Dec 4, 2022Dec 4, 2022

• HIBAG.gpu

  Public
  GPU-based implementation for the HLA genotype imputation method (HIBAG)

  C++

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Oct 21, 2021Oct 21, 2021

• HLAModelMatcher

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Jul 28, 2021Jul 28, 2021

• imputePipeline

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 26, 2021Jul 26, 2021

• peptMaker

  Public
  Python

  •1•0•0•0•Updated Jun 23, 2021Jun 23, 2021

• sseqTCR_KMERS

  Public
  Python

  •0•0•0•0•Updated Nov 3, 2020Nov 3, 2020

• demux10xFastq

  Public
  Python

  •0•0•0•0•Updated Sep 12, 2020Sep 12, 2020

• parseAffy6

  Public
  convert Affymetrix GW6 SNP export to plink tped format

  Python

  •0•0•0•0•Updated Aug 12, 2020Aug 12, 2020

• TCR_usages

  Public
  Collection of scripts associated with correlating HLA genotypes with TCR usages

  Jupyter Notebook

  •0•0•0•0•Updated Jul 24, 2020Jul 24, 2020

• Multiseq10x

  Public
  Python

  •0•1•1•0•Updated Jul 20, 2020Jul 20, 2020

• singleTCRSeq

  Public
  Python

  •0•0•0•0•Updated Dec 14, 2019Dec 14, 2019