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Allow to perform simple phenopacket sanitation #194

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ielis opened this issue Sep 15, 2023 · 0 comments
Open

Allow to perform simple phenopacket sanitation #194

ielis opened this issue Sep 15, 2023 · 0 comments
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enhancement New feature or request

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ielis commented Sep 15, 2023

Allow to perform simple sanitation on a phenopacket:

  • replace obsolete HPO term IDs with the current IDs based on the provided ontology. Refuse to work if the provided ontology is older
  • remove phenotypic feature duplicates
  • remove ancestors of the present features and descendants of the excluded features
@ielis ielis added the enhancement New feature or request label Sep 15, 2023
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