cookiecutter.json

{
  "tool_name": "chainsaw",
  "cwl_version": "v1.0",
  "tool_label": "Include short description of the tool!",
  "tool_doc": "Copy the tool documentation here",
  "dockerPull": "Specify dockerhub repo/imagename",
  "input_path": "path/to/inputfile",
  "input_position": "1",
  "input_doc": "Describe input here.",
  "outfile_name": "outfile1",
  "base_command": "command to be run",
  "orig_software": "Name of original software",
  "orig_software_description": "Short description of original software",
  "orig_software_url": "url to original software",
  "orig_software_license": "license of original software",
  "orig_software_author": "author of original software",
  "license": "https://spdx.org/licenses/Apache-2.0",
  "copyright_holder": "Biozentrum, University of Basel",
  "author": "Christina J. Herrmann",
  "email": "christina.herrmann@unibas.ch",
  "organization":"Biozentrum, University of Basel",
  "location": "Klingelbergstrasse 50/70, CH-4056 Basel, Switzerland",
  "lab": "Zavolan Lab"
  "date": "2018-12-24"
  "repo": "https://github.com/zavolanlab/CWL_repository"
}