From b6993d4dff97aefcce5419a80b681ec1e4f9a47b Mon Sep 17 00:00:00 2001 From: "Oriol (ZBook)" Date: Tue, 27 Dec 2022 17:42:23 +0100 Subject: [PATCH] update requirements to prepare Dec 22 snapshot --- requirements.in | 3 +- requirements.txt | 93 ++++++++++++++++++++++++++++++++---------------- 2 files changed, 64 insertions(+), 32 deletions(-) diff --git a/requirements.in b/requirements.in index 8cd3b11..ee80d59 100644 --- a/requirements.in +++ b/requirements.in @@ -1,7 +1,6 @@ nbgitpuller # Data analytics -pymc3 +pymc<5 graphviz seaborn -numpy==1.21.5 diff --git a/requirements.txt b/requirements.txt index 988409a..7fc228a 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,9 +1,15 @@ # -# This file is autogenerated by pip-compile with python 3.9 -# To update, run: +# This file is autogenerated by pip-compile with Python 3.9 +# by the following command: # -# pip-compile requirements.in +# pip-compile --resolver=backtracking requirements.in # +aeppl==0.0.38 + # via pymc +aesara==2.8.7 + # via + # aeppl + # pymc anyio==3.4.0 # via jupyter-server argon2-cffi==21.3.0 @@ -12,8 +18,8 @@ argon2-cffi==21.3.0 # notebook argon2-cffi-bindings==21.2.0 # via argon2-cffi -arviz==0.11.4 - # via pymc3 +arviz==0.14.0 + # via pymc attrs==21.4.0 # via jsonschema backcall==0.2.0 @@ -21,11 +27,18 @@ backcall==0.2.0 bleach==4.1.0 # via nbconvert cachetools==5.0.0 - # via pymc3 + # via pymc cffi==1.15.0 # via argon2-cffi-bindings cftime==1.5.1.1 # via netcdf4 +cloudpickle==2.2.0 + # via pymc +cons==0.4.5 + # via + # aesara + # etuples + # minikanren cycler==0.11.0 # via matplotlib debugpy==1.5.1 @@ -34,16 +47,18 @@ decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert -dill==0.3.4 - # via pymc3 entrypoints==0.3 # via # jupyter-client # nbconvert +etuples==0.3.8 + # via + # aesara + # minikanren fastprogress==1.0.0 - # via pymc3 + # via pymc filelock==3.4.2 - # via theano-pymc + # via aesara fonttools==4.28.5 # via matplotlib graphviz==0.19.1 @@ -87,6 +102,11 @@ jupyterlab-pygments==0.1.2 # via nbconvert kiwisolver==1.3.2 # via matplotlib +logical-unification==0.4.5 + # via + # aesara + # cons + # minikanren markupsafe==2.0.1 # via jinja2 matplotlib==3.5.1 @@ -97,8 +117,15 @@ matplotlib-inline==0.1.3 # via # ipykernel # ipython +minikanren==1.0.3 + # via aesara mistune==0.8.4 # via nbconvert +multipledispatch==0.6.0 + # via + # etuples + # logical-unification + # minikanren nbclient==0.5.9 # via nbconvert nbconvert==6.4.0 @@ -125,36 +152,35 @@ notebook==6.4.6 # via nbgitpuller numpy==1.21.5 # via - # -r requirements.in + # aeppl + # aesara # arviz # cftime # fastprogress # matplotlib # netcdf4 # pandas - # patsy - # pymc3 + # pymc # scipy # seaborn - # theano-pymc # xarray + # xarray-einstats packaging==21.3 # via # arviz # bleach # matplotlib -pandas==1.3.5 + # xarray +pandas==1.5.2 # via # arviz - # pymc3 + # pymc # seaborn # xarray pandocfilters==1.5.0 # via nbconvert parso==0.8.3 # via jedi -patsy==0.5.2 - # via pymc3 pexpect==4.8.0 # via ipython pickleshare==0.7.5 @@ -178,7 +204,7 @@ pygments==2.11.2 # ipython # jupyterlab-pygments # nbconvert -pymc3==3.11.4 +pymc==4.4.0 # via -r requirements.in pyparsing==3.0.6 # via @@ -198,16 +224,16 @@ pyzmq==22.3.0 # jupyter-client # jupyter-server # notebook -scipy==1.7.3 +scipy==1.9.3 # via + # aeppl + # aesara # arviz - # pymc3 + # pymc # seaborn - # theano-pymc + # xarray-einstats seaborn==0.11.2 # via -r requirements.in -semver==2.13.0 - # via pymc3 send2trash==1.8.0 # via # jupyter-server @@ -215,7 +241,7 @@ send2trash==1.8.0 six==1.16.0 # via # bleach - # patsy + # multipledispatch # python-dateutil sniffio==1.2.0 # via anyio @@ -225,8 +251,10 @@ terminado==0.12.1 # notebook testpath==0.5.0 # via nbconvert -theano-pymc==1.1.2 - # via pymc3 +toolz==0.12.0 + # via + # logical-unification + # minikanren tornado==6.1 # via # ipykernel @@ -247,17 +275,22 @@ traitlets==5.1.1 # nbconvert # nbformat # notebook -typing-extensions==3.10.0.2 +typing-extensions==4.4.0 # via + # aesara # arviz - # pymc3 + # pymc wcwidth==0.2.5 # via prompt-toolkit webencodings==0.5.1 # via bleach websocket-client==1.2.3 # via jupyter-server -xarray==0.20.2 +xarray==2022.12.0 + # via + # arviz + # xarray-einstats +xarray-einstats==0.4.0 # via arviz # The following packages are considered to be unsafe in a requirements file: