-
Notifications
You must be signed in to change notification settings - Fork 2
/
setup.py
executable file
·307 lines (276 loc) · 9.15 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
#!/usr/bin/env python
"""
PETSc: Portable, Extensible Toolkit for Scientific Computation
==============================================================
The Portable, Extensible Toolkit for Scientific Computation (PETSc),
is a suite of data structures and routines for the scalable (parallel)
solution of scientific applications modeled by partial differential
equations. It employs the Message Passing Interface (MPI) standard for
all message-passing communication.
.. tip::
You can also install `petsc-dev`_ with::
$ pip install petsc==dev
.. _petsc-dev: http://petsc.cs.iit.edu/petsc/
petsc-dev/archive/tip.tar.gz#egg=petsc-dev
"""
import sys, os
from distutils.core import setup
from distutils.util import get_platform, split_quoted
from distutils.spawn import find_executable
from distutils.command.build import build as _build
if 'setuptools' in sys.modules:
from setuptools.command.install import install as _install
else:
from distutils.command.install import install as _install
from distutils.command.sdist import sdist as _sdist
from distutils import log
init_py = """\
# Author: PETSc Team
# Contact: petsc-maint@mcs.anl.gov
def get_petsc_dir():
import os
return os.path.dirname(__file__)
def get_config():
conf = {}
conf['PETSC_DIR'] = get_petsc_dir()
return conf
"""
metadata = {
'provides' : ['petsc'],
'requires' : [],
}
def bootstrap():
# Set PETSC_DIR and PETSC_ARCH
PETSC_DIR = os.path.abspath(os.getcwd())
PETSC_ARCH = get_platform() + '-python'
os.environ['PETSC_DIR'] = PETSC_DIR
os.environ['PETSC_ARCH'] = PETSC_ARCH
sys.path.insert(0, os.path.join(PETSC_DIR, 'config'))
# Generate package __init__.py file
from distutils.dir_util import mkpath
pkgdir = os.path.join('config', 'pypi')
if not os.path.exists(pkgdir): mkpath(pkgdir)
pkgfile = os.path.join(pkgdir, '__init__.py')
fh = open(pkgfile, 'wt')
fh.write(init_py)
fh.close()
# Simple-minded lookup for MPI and mpi4py
mpi4py = mpicc = None
try:
import mpi4py
conf = mpi4py.get_config()
mpicc = conf.get('mpicc')
except ImportError: # mpi4py is not installed
mpi4py = None
mpicc = os.environ.get('MPICC') or find_executable('mpicc')
except AttributeError: # mpi4py is too old
pass
if ('setuptools' in sys.modules):
metadata['zip_safe'] = False
if not mpi4py and mpicc:
metadata['install_requires']= ['mpi4py>=1.2.2']
def config(dry_run=False):
log.info('PETSc: configure')
options = [
'PETSC_ARCH='+os.environ['PETSC_ARCH'],
'--with-shared-libraries=1',
'--with-debugging=0',
'--with-c2html=0', # not needed
#'--with-sowing=0',
#'--with-cmake=0',
]
# MPI
try:
import mpi4py
conf = mpi4py.get_config()
mpicc = conf.get('mpicc')
mpicxx = conf.get('mpicxx')
mpif90 = conf.get('mpif90')
except (ImportError, AttributeError):
mpicc = os.environ.get('MPICC') or find_executable('mpicc')
mpicxx = os.environ.get('MPICXX') or find_executable('mpicxx')
mpif90 = os.environ.get('MPIF90') or find_executable('mpif90')
if mpicc:
options.append('--with-cc='+mpicc)
if mpicxx:
options.append('--with-cxx='+mpicxx)
if mpif90:
options.append('--with-fc='+mpif90)
else:
options.append('--with-mpi=0')
# Extra configure options
config_opts = os.environ.get('PETSC_CONFIGURE_OPTIONS', '')
config_opts = split_quoted(config_opts)
options.extend(config_opts)
log.info('configure options:')
for opt in options:
log.info(' '*4 + opt)
# Run PETSc configure
if dry_run: return
import configure
configure.petsc_configure(options)
import logger
logger.Logger.defaultLog = None
def build(dry_run=False):
log.info('PETSc: build')
# Run PETSc build
if dry_run: return
use_builder_py = False
if use_builder_py:
import builder
builder.PETScMaker().run()
import logger
logger.Logger.defaultLog = None
else:
make = find_executable('make')
status = os.system(" ".join(
[make, 'all']
))
if status != 0: raise RuntimeError(status)
def install(dest_dir, prefix=None, dry_run=False):
log.info('PETSc: install')
if prefix is None:
prefix = dest_dir
options = [
'--destDir=' + dest_dir,
'--prefix=' + prefix,
]
log.info('install options:')
for opt in options:
log.info(' '*4 + opt)
# Run PETSc installer
if dry_run: return
use_install_py = True
if use_install_py:
import install
install.Installer(options).run()
import logger
logger.Logger.defaultLog = None
else:
make = find_executable('make')
status = os.system(" ".join(
[make, 'install', 'DESTDIR='+dest_dir]
))
if status != 0: raise RuntimeError(status)
class context:
def __init__(self):
self.sys_argv = sys.argv[:]
self.wdir = os.getcwd()
def enter(self):
del sys.argv[1:]
pdir = os.environ['PETSC_DIR']
os.chdir(pdir)
return self
def exit(self):
sys.argv[:] = self.sys_argv
os.chdir(self.wdir)
class cmd_build(_build):
def initialize_options(self):
_build.initialize_options(self)
PETSC_ARCH = os.environ.get('PETSC_ARCH', '')
self.build_base = os.path.join(PETSC_ARCH, 'build-python')
def run(self):
_build.run(self)
ctx = context().enter()
try:
config(self.dry_run)
build(self.dry_run)
finally:
ctx.exit()
class cmd_install(_install):
def initialize_options(self):
_install.initialize_options(self)
self.optimize = 1
def run(self):
root_dir = self.install_platlib
dest_dir = os.path.join(root_dir, 'petsc')
bdist_base = self.get_finalized_command('bdist').bdist_base
if dest_dir.startswith(bdist_base):
prefix = dest_dir[len(bdist_base)+1:]
prefix = prefix[prefix.index(os.path.sep):]
else:
prefix = dest_dir
dest_dir = os.path.abspath(dest_dir)
prefix = os.path.abspath(prefix)
#
_install.run(self)
ctx = context().enter()
try:
install(dest_dir, prefix, self.dry_run)
finally:
ctx.exit()
class cmd_sdist(_sdist):
def initialize_options(self):
_sdist.initialize_options(self)
self.force_manifest = 1
self.template = os.path.join('config', 'manifest.in')
def version():
import re
version_re = {
'major' : re.compile(r"#define\s+PETSC_VERSION_MAJOR\s+(\d+)"),
'minor' : re.compile(r"#define\s+PETSC_VERSION_MINOR\s+(\d+)"),
'micro' : re.compile(r"#define\s+PETSC_VERSION_SUBMINOR\s+(\d+)"),
'patch' : re.compile(r"#define\s+PETSC_VERSION_PATCH\s+(\d+)"),
'release': re.compile(r"#define\s+PETSC_VERSION_RELEASE\s+(\d+)"),
}
petscversion_h = os.path.join('include','petscversion.h')
data = open(petscversion_h, 'rt').read()
major = int(version_re['major'].search(data).groups()[0])
minor = int(version_re['minor'].search(data).groups()[0])
micro = int(version_re['micro'].search(data).groups()[0])
patch = int(version_re['patch'].search(data).groups()[0])
release = int(version_re['release'].search(data).groups()[0])
if release:
v = "%d.%d" % (major, minor)
if micro > 0:
v += ".%d" % micro
if patch > 0:
v += ".%d" % patch
else:
v = "%d.%d.dev%d" % (major, minor+1, 0)
return v
def tarball():
VERSION = version()
if '.dev' in VERSION:
return None
bits = VERSION.split('.')
if len(bits) == 2: bits.append('0')
PETSC_VERSION = '.'.join(bits[:-1]) + '-p' + bits[-1]
return ('http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/'
'petsc-lite-%s.tar.gz#egg=petsc-%s' % (PETSC_VERSION, VERSION))
description = __doc__.split('\n')[1:-1]; del description[1:3]
classifiers = """
License :: Public Domain
Operating System :: POSIX
Intended Audience :: Developers
Intended Audience :: Science/Research
Programming Language :: C
Programming Language :: C++
Programming Language :: Fortran
Programming Language :: Python
Topic :: Scientific/Engineering
Topic :: Software Development :: Libraries
"""
bootstrap()
setup(name='petsc',
version=version(),
description=description.pop(0),
long_description='\n'.join(description),
classifiers= classifiers.split('\n')[1:-1],
keywords = ['PETSc', 'MPI'],
platforms=['POSIX'],
license='PETSc',
url='http://www.mcs.anl.gov/petsc/',
download_url=tarball(),
author='PETSc Team',
author_email='petsc-maint@mcs.anl.gov',
maintainer='Lisandro Dalcin',
maintainer_email='dalcinl@gmail.com',
packages = ['petsc'],
package_dir = {'petsc': 'config/pypi'},
cmdclass={
'build': cmd_build,
'install': cmd_install,
'sdist': cmd_sdist,
},
**metadata)