LinkML semantic schemas for Regen Network framework.
Install LinkML to use the helper and generator commands for interacting with LinkML schemas and data.
- LinkML schemas are created in
schema/src
. - Create separate schema files for each logical schema class and
import
into the rootschemas.yaml
file. - Generated markdown from schemas:
gen-doc schema/src/schemas.yaml --directory schema/generated --diagram-type er_diagram make gen-doc
- Generate linkml enums for taxonomy terms:
make gen-taxonomy