From ad5e9b0c6b52ef94cc9934f083b219618c2e5311 Mon Sep 17 00:00:00 2001 From: Laurent Gatto Date: Tue, 9 Apr 2024 10:18:40 +0200 Subject: [PATCH] install MsDataHub from Github --- .github/workflows/check-bioc.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml index 58cdc219..859fbe1a 100644 --- a/.github/workflows/check-bioc.yml +++ b/.github/workflows/check-bioc.yml @@ -223,11 +223,11 @@ jobs: cd preprocessCore R CMD INSTALL --configure-args="--disable-threading" . - - name: Install MsCoreUtils from Github (to get version 1.10.11) - run: BiocManager::install("RforMassSpectrometry/MsCoreUtils") + - name: Install MsDataHub from Github (>= 1.3.3) + run: BiocManager::install("RforMassSpectrometry/MsDataHub") shell: Rscript {0} - - name: Install ProtGenerics from Github (to get version 1.27.1) + - name: Install ProtGenerics from Github (>= 1.35.1) run: BiocManager::install("RforMassSpectrometry/ProtGenerics") shell: Rscript {0}