From 4a25d6cb675f52fed3c19b91f93856ef86f9fd64 Mon Sep 17 00:00:00 2001 From: Danila Bredikhin Date: Mon, 20 Feb 2023 15:11:04 -0500 Subject: [PATCH] Update changelog info for the next version (v0.1.3) --- docs/source/changelog.rst | 17 ++++++++++++----- 1 file changed, 12 insertions(+), 5 deletions(-) diff --git a/docs/source/changelog.rst b/docs/source/changelog.rst index 2a5af09..4218da3 100644 --- a/docs/source/changelog.rst +++ b/docs/source/changelog.rst @@ -13,11 +13,18 @@ v0.1.3 ------ This release comes with new features and improvements: -* MOFA can be now run in the stochastic mode (SVI) using the new arguments for :func:`muon.tl.mofa` -* MOFA model weights can be visualised with :func:`mu.pl.mofa_loadings` -* Plotting module has gained new plots such as :func:`muon.pl.scatter` -* It is now possible to define layers as `{modality: layer}` in :func:`mu.pl.embedding` -* `pysam` not being installed is now handled more gracefully (#46). + +* MOFA can be now run in the stochastic mode (SVI) using the new arguments for :func:`muon.tl.mofa`. + +* MOFA model weights can be visualised with :func:`muon.pl.mofa_loadings`. + +* Plotting module has gained new plots such as :func:`muon.pl.scatter`. + +* It is now possible to define layers as ``{modality: layer}`` in :func:`mu.pl.embedding`. + +* Improvements to the TF-IDF normalisation interface including view handling. + +* Dependencies are handled better now such as ``pysam`` and ``scikit-learn``. v0.1.2 ------