.gitignore

# Prerequisites
*.d

# Compiled Object files
*.slo
*.lo
*.o
*.obj

# Precompiled Headers
*.gch
*.pch

# Compiled Dynamic libraries
*.so
*.dylib
*.dll

# Fortran module files
*.mod
*.smod

# Compiled Static libraries
*.lai
*.la
*.a
*.lib

# Executables
*.exe
*.out
*.app


# ipynb notebooks
*.ipynb


# Genotype lists
geno_list0.txt

# Runfiles
*.sh.*

# Outfiles
.scratch
scratch
times*txt
stats*txt
out*txt

# Other files
frnadb_summary.zip
gp_maps/

# Bazel
*~
bazel-*
# .bazelrc
.idea

# .DS_Store
.DS_Store

# ViennaRNA
ViennaRNA

# Server and results
copy_to_server.sh
copy_from_server.sh
notebooks/outs/

# Data
data/
plotting/ny
plotting/gp_maps_nav_data
plotting/outs_final_nee

# Python
__pycache__
.venv

# RNAshapes
RNAshapes-2.1.6*
RNAshapes/bin/
RNAshapes/man/