From 50207fa27e13e15cfe2d94347959f3338f061551 Mon Sep 17 00:00:00 2001
From: Christian Meesters <meesters@uni-mainz.de>
Date: Wed, 24 Apr 2024 18:13:21 +0200
Subject: [PATCH] feat: added generic config workflow profile

---
 setup/tutorial/profile/config.yaml | 19 +++++++++++++++++++
 1 file changed, 19 insertions(+)
 create mode 100644 setup/tutorial/profile/config.yaml

diff --git a/setup/tutorial/profile/config.yaml b/setup/tutorial/profile/config.yaml
new file mode 100644
index 0000000..5229ca3
--- /dev/null
+++ b/setup/tutorial/profile/config.yaml
@@ -0,0 +1,19 @@
+default-resources:
+  slurm_partition=barnard
+
+set-resources:
+    bwa_map:
+        runtime: 5 # real scenarios will take more
+        mem_mb_per_cpu: 1800
+
+    samtools_sort:
+        runtime: 5
+        mem_mb_per_cpu: 1800
+
+    samtools_index:
+        runtime: 5
+        mem_mb_per_cpu: 1800
+
+    bcftools_call:
+        runtime: 15
+        mem_mb_per_cpu: 1800