TranslatingRNAintoProtein.py

RNA_CODON_TABLE = {
    "UUU":"F", "UUC":"F", "UUA":"L", "UUG":"L",
    "UCU":"S", "UCC":"S", "UCA":"S", "UCG":"S",
    "UAU":"Y", "UAC":"Y", "UAA":"STOP", "UAG":"STOP",
    "UGU":"C", "UGC":"C", "UGA":"STOP", "UGG":"W",
    "CUU":"L", "CUC":"L", "CUA":"L", "CUG":"L",
    "CCU":"P", "CCC":"P", "CCA":"P", "CCG":"P",
    "CAU":"H", "CAC":"H", "CAA":"Q", "CAG":"Q",
    "CGU":"R", "CGC":"R", "CGA":"R", "CGG":"R",
    "AUU":"I", "AUC":"I", "AUA":"I", "AUG":"M",
    "ACU":"T", "ACC":"T", "ACA":"T", "ACG":"T",
    "AAU":"N", "AAC":"N", "AAA":"K", "AAG":"K",
    "AGU":"S", "AGC":"S", "AGA":"R", "AGG":"R",
    "GUU":"V", "GUC":"V", "GUA":"V", "GUG":"V",
    "GCU":"A", "GCC":"A", "GCA":"A", "GCG":"A",
    "GAU":"D", "GAC":"D", "GAA":"E", "GAG":"E",
    "GGU":"G", "GGC":"G", "GGA":"G", "GGG":"G",}

def replaceCodons(rnasequence):
    i = 0
    protein = ""
    rnasequence = rnasequence.replace("\n","")
    while (i < len(rnasequence)):
        if(RNA_CODON_TABLE[rnasequence[i:i+3]]== 'STOP'):
            break
        protein += RNA_CODON_TABLE[rnasequence[i:i + 3]]
        i += 3
    protein = protein.replace('STOP','')
    print(protein)

inputRNA = 'AUGGGUGUCCAGAAAGGCUUGGACUUGGACUUGCGAUCGGCAGGCAAUUUGACCAUAAGACACCGAAUAACUUUGUCAUCGGCUGGACAAGCCUGUGGUAGCCGGAAGGUUCGGACUCACAGAAAGGAGCGUAGUGUAAUUUUUAGGGCGGUAGUAACGCGUGACGUUCUGCUGACCAUGCUAGGCCGGAGAUACAACGGUGCCCUUUCGGGGUGGUAUGUGCUGCUCACACGGGAGCCUGUCUAUCUCGCCCUGAUGGAUGGCGCCCACAAAUCCACAACUCACAUAGAACAAUGUUUAUGCAGAGUUCUGCUCAUCGAUAGAUUGCUGAUGACUUCAAAUAGUAAUUCCGUAACCCCGUCGGUGGAGGGCACGUCAGGGGCUAGGGGUACGCUUGAUAAGAUUCCUAUUAUAACUGCUUCGUUUAGAGUAAACUACCCAUGCGAGCUUGUUGCUGGAUCCUUGACUCGCACAUCCAGAUGGGCCAUGCCUGAAGCCCGGAGCGGCAAAAUCAUGGACAGUUGUCCAUGGCAUCGCUCGUCUACACCUUGCGCCGCCAAGUUAUCAAUUUCCAAUGCACAAGGUGCAGUAGCGGUAGUCGGGACCGUAGCGGUUUCGGGCCGUGUGGGGUGGAAUUUUUCUGAUUUCUGGUGUUGUGUAAUCGGACAUCUUGUAGAGCCUGCGCCGGUUCUAAUAACGUGUGAAUGUAGGGUCGUUGGGACGGAUUUCCGGUGGGUGAUGCGGUAUAAUCCUACUUGGUGGUCGCAUCGUUCGAAGGUUCCUUCACUACUCAGGGAACUGAACAUGGCCGUGAAUAUUAUACUCGAUUCUAGUCUGGGUUGCCUUGUCCUAAGGGGUCCUGCGCCUUCUUUAAGCUGCUGGGAAAACUCGACAAAGGGGCCGGGCAGAUCCCUCACGGACCUGGUGCUACAAGCCGGUAACCACCAGGGAAGCACGCGUGCCUAUGUUGCUUCGGGAGAGCCAGGUGCUAUCUCUCCAGGAAGUAUGUCGUAUCCACUCCACACACCUACCGCACGUUGUGAGGUUCUCUCUGCUGAUCACGUCCCUCCGGGCUAUAUAGGACUAUCGCUAAAUCUCGCUCGACGCGUUGUCAACGCUUAUGACUGGGGUGAAACACGCAACUGUUUCGCCCACGCUCCAACUCUAAGCCUGGGACGUGCAGUACCAAUGAGGGGGCACGGUCGUACAAGCGGUUACUCUCAAACGUUGUUGUUCGAAAGGGACGUUAGUACCCCUACGUAUUACGCUUUGAUCACCUUAGAGGUCAUAAAGUACGAGGCAUGUAAUGAGCGGAAACUCCAGGCCCUCAGAAGUUCAACAAAUUCACUCUUCACCUGCUCUACUACGUUUCGCUGCAUAAUCCGACGACUCAGUUGUAUUAUCAUGUCCGUCACCCAGCAUCUCACACGGUUACCUAAUAGCCGCCCUGAACUUCAACACAUAACGCGGGCUAGUGCGCUUAGAGAUAACUGCGUUCUUGUCUUCAACAGCGGAGCGAGACUGGCGGUAAUAAGGGAUCGCAUUUUACCCCAAACGUCAGACCGCCCUGUUCGCAUCACUGGGUUCUCAUGCGGACGGCGCAGAUUUUGGGAGAUUGCAGGAUGGCGGACAUUCUACGGGAAUCGUAAUACGGUAAAUCCCGAAACAUACAGAAUUCUAUUCAAUCGUAUAAAUUAUACGUCAACAUAUCCAGUAACCCAUGACAAUCUCGGGGAGGUAGCUUGGCCCAUAAAGUUGAGAGGUGCGACCACCGGACUGGUUGGCACCAUCCCUCCGUAUCAAGUACGUCGUAACUAUCAUCAUACGUGGAUCGAUUCCAAUAGAGGUAGAGCCCAAUACCGCUGUGAUAUUGAAACACCAGUCCCGUUAGUAUUGAGUCAUGUCCCGAUCGUUUUCCGCUUUCUUGGUUCAGCCAGAGCUAGACGUCGGGCCCAUUUGGCUGAGACUACCGCGACUUUAGAUUGUCGCCAGACGGGUACGAGGGCAUUCCAUGGAAUCCCCCAGCCCAGUGAACCGGAUCCUUCAGUCGCACAGAUCCGCUUUCCUAACAGGCUUUUGAAUGUGCACAUAGCUCGGAUUCUGUCCAGGUUAGAAGACGCUAGUGUGAUAAGCCUGCCAAAGCUGUACAACGUCAGAGUCACUUGUAAGGCAAUCCGGCAGCUGCCAAAGGCUGUAGUCUUAAAUGUAGAGGUGCCGUACCACGCGUGCGCUUUAUUUGAUCGGGGAGCUCUUAUCAAGUUUUGCCAGGUUUAUGUACUAGGCCAGGCUCGGAGUAUUGGGCACCGACACCUGCCGCCAUGCAAAUCGGGCUCAACAAGGGGCCACCUUGCACGGUCCAUGGAGAGCCCAUGUCCCACUUGCCCGCCUAGUAUCGUAUACGAAGUUCAGGUUCAAUUGGACAGGAGGUUGAAGGGGGGUGCCCUCAGUUGUGGCUGUUUACUUUUCAUCGUCAACUUAGACCGACCCGCUGGUACUGACGACGCCGUAUGUCAAGCAGCCUGGCUAUCGGCGAAGGGAAAGAAUACUGAAGGGCCAGGGGUCGCGGACAAUAAAAGUUGGUCGGGCGGCGGAAGGGGCCAAUGCGGCUCAGGACAGGGGAUCGGACCUGAGAGUGAGACAACUGAACGACGGGUCUCGCAUACGCGCGGUGCAUCGUCAAAGCGUCUCAAAACACAAUUUGCAAGUGCACUGCACCGUUGUCUAAUUCUGGGAGAGGCUCGUCAAGGGCUACGGAUGAGAAGUUCGCAGUGCCAUGCCGGGUUGCUCCACGGAGAGACGAAUCAGCGGCAGUCUGAGUAUAAUGAUCAAGGGAAACUCCCGCGAUGGCGCUUAGCUAAUCGAGUGAAAGACUCGGGGGCCGGCGGCCUAUGUAGCUUUUGUGGGGUAAAGCACGUUCUGUGUCUGUCAGAUAUAAUGCCAUAUGUUGCCGGUCGCGACCACUUUUGCCGGUCCCGGGGGGAAUCAAUUAGCUUGAGUCUAACGUGUGCGCCCUCUCCUUCCGUAAUUUGUGUAAUAACCCGGCCUUUCAAAUUCCGAAUUUUGGCAUUAGCCAAAAAUAGGGACAGACUUCUGAGACUGUACGACAACAAAUCCGUCCCAAGCGGUGACGCUCAUCUGAAACGUGCAGACGGUUUCAGGUUGUCAUGUUCACCACCAGAAUGUCGUGCCUAUUAUACCUACGCCACCAGCAAUUCUAUGCUCACUUCUUCGAGAAUUAAGGAACUAACGUUUUCCAGGUGCGACUGUAAGCCACCUGUAUGGGUGCGCAAAGAGAGCCUGAAUGCUACCGUAUUGGGUCGUCCGUAUUUUAAAAUGGGCAUAGAUUUCUCCGUCCAUCAUGAUGUUAAUCCGAGUGGAUUAGGCACGCACCUUUUGCGUGGCGAUCAAGCGUUCUGCCAUCACGUGUUUGUGUCAUGGUCUUGUACAACUCAAGUCUGGGUGUUAGCAUCUGAGAGUGCGAAAUUGGACGUCCUGACCUACCGUUGCUGUUAUGGCAUGACCACCAAGUAUGUACCCGGCGUGUUCAGCUUUGUGGUGCAUUCGCGUCUGAGAACCCAAACUGCUGUGAUUUGGUCAUACAGCUCUCAGUCGGCUGCUUUACCUGGGAGUACCUCGAAGGGACUUAUGUCUUUCUUAUGUCCUAGAACAAUGAAGGAAGUUAUUUCCUUAUCCGCGUCUCCGCGAUUGCUUCCCUCCCUGAAAAGACCUGUAGGUUUCCCAUUCAGUCUUCACGUGAAAAUUCGUUCGGAAAUUUCGUGCUUUUCCUUCAGGAAGGACUGUAGACCCGCCUACAGGGCGUGGACCAUAGGGGCUCGGGCGACCGUACACGAAACACCAACUCCCUGCAGAAAUCCGCGUCGGCGAGUUGCGCAACUCACGUCGACGAUGCUUGAUAGUAACUUAAUAGGACCCUUAAGUGUCGAAAAUUGGUGUUCUAACGCGUGGGCUCUCAAUUGUCGUGUGCGAGGAGGUCAUUAUGGGCACGAGAUUUUAUGUGCCGUAAAAGUUGGAGGAAUAGAUCGAGUAUGGGAACACUUGCUCAACUCCGGCGAGACCCGCGGGUUACAACCCUGGCGCCUAAUGAGCCAUGGUUUGCUUUCGCUCCUGAUGCCCCGUAGCGGGCUCGAUCCGCUUUCAGCUGGAAGCCAAGGCAGCAAGCGAGGGGUAGCCCUACAGCACGACAAACAGGAGAACCAGUGCGUGCCUGAAUUUACUGAUCAGAUGAGGCGGCGUUUAGCUAGAAUACAAAACAGCGACGCCGCACAAUAUUAUCAGCCACGGAUGUACUUUAAAAGGAUUCUUAUUGGCGUCUGUAAGGGCGACUCUUCAUCCGAUCGCAUCCUAUUAUCAUCAGUCUCUGCGCUCAGGCCGGGCGCCGGCCACUGUGUUUACAAAGCGCAACGGGGGACCCUGGGUGGGUCUUACUACAUCUACGACGCUACAAUUAGUAUGGCAAGUCGCAAGGUAGGAUCUCUGGAACAUGGGUCAGUAAAGGGACAGCUUCCUUCGUGGGUUAUGCAUUGGCUCCAUCGUCUCUGUCUCAUUCAUGGCACACUGUUUCUGUUUCCAUUCGUUUUACGCGCAAUUCUGUUUGAUCCCGUCAACCUGCACAAGAGCAACCCACUCACACCUGCGUCCCAUUUAAGGCCAGAUAACUAUGUGCCAGUGAAAGGGGUAGAUGCCACAUCCGAGUGCAGGGUCAUUGCCGUAUCAGGAUGUUAUCUUAGUAGGGUGGGGUGCCCCUGUUUGUUGCGCAGUGCGGCCCUGUCCGGGAAUCUGAAAGUCGACUUUCCAGAAGAUGGAAAACACAAAGGGGGAUGUAGCUGCACCGUGCAGAUACCAGCUAGUGGUAACCCGCAGAUAGUGAGAGUGCAUUGGGGAGGGAGCGCGUCAAUCAGAGAGCGGUUGGGGCAAUUCCUGCGUGUAAUGAAUUCCCUAGGGGAUUCCGCGUGUGCUAAACGCCGAAUACCUGUUGACUUAUUGGUUUGGCCCCGAUAUUCAGACAGAUGCGGGGGGUACACACACUUCCUGCGAUCCAGCGUAAUGAAUUCAACUGGGAUGCCCUCCCAGUCGGGUGACACAGCCCUCUUUCAGGGAACAAUGCCCAGAACCAGCGCUAGAGGUUCGAUACCGCGGAAUAAUAUAAUGUGCUACCCUGGCAAAGUAACGAACGUGAAACUCAAGCUCGCACGUGUCUAUCGCGAGCACAUGGUAGUCCGCCUGAGGUUUUGCGGGAGUAACUUGUCAAUAUCAGUCAAAGUCAUCUCAGAAUAUCACACACCUCUCGGGCAUGAUUCGCAUAUUGCUGAAGGACAUCGCAAUGUAGUACUCAUGUCCAUAGGCAAGAGUAGUAAGGUUGAGCUGCCCCGGACUAUGGGAAUAGCCCCUUAUGGUGCUAUCCAGGAAACUACGGAUUUGAACAAUUUGGAUCCAAAAGAGCUACCGCUAAAGGGUACAAUUAGUUCUAACCUAAUUAUGAGUUUCACGGUUAGGCUGCCUCGACUGGCAGUACAUUCGCGCUCGGCUCUUUUGCCUAGCACUGCUCUCAAAAUAGAUUUCAGAAAAGGUAAAUACUGCUCGACCAAACGGGUGUCUGCUAAGAAUUUGUGUCCGGCGGGUCAUUGUACUUUGGCAUUUCUAAAUUUACCGAGGAUAGAAACGAACACAGAGUGUAUUCUUCUGUCCGUAUCCGGUUUUGUAUCGGGGAUACCGAUGCUGCAUAGAUCAUAUCGUAGGUGUGAAGGUGGGUCUCCAUUUUCUGUUAACACUUACCUACACUUGAAGACCGACGUAGGCAGAUACGCCGCUACCGGUUGGCAGGACGGUCCAAGAGGCCUACGGGGCUACAUGCACCGUUCCAAACCAGAAACCUAUGUGAAAAUAUUAUGGAGCUCAAUCACUCGUUGUCAGCGUGGCCAGGGCCCAGUCCGCCCGACCGCAACUUUUGCAGAAUACGGGACUUACGGGAACGCCGUUAUGGGCGUAUCAUUCCAUUCAAGAUUGCCGUACUUAACGUCUACUGUCUCCCAGCUACGUUACAAAAGAACGUUGCCGAUAGGUCCAACCCAGAGCUCCCGUUUCAGCAAAGCUUCGAAAGUUACCUCGCGCAGUCUCCGUUCAUCCUGUGGCACCCUCAAGUAUCGCUACCCCGUACAAUCCACCUGUACGGAGGUGUUAUCUAACCUCGCUACAUUCCCUCCAAACAGCCCCCGAGGUUGUCCCUCUAAGAACAGAUACAUGGGUCGACGUGAAGAGAAAAUUAGAAGAUACGGCCGGGAGGCACGUACUACGACGCUGGUUCCAAAAGCGAGGGAGUGGCCAACGUAUACUCUGUUACAACAACUACAUCCUCCGGCGUCUCAAGUGAAAUUUAUGAAAAAACUGAAUGGUAGGCUUUUGUUUAGAGAGAAUAGAAUCGAAGAAGGUCGCAUCCACAGCUCCCAUUGCCUCCGCAGGUAUACAUUCGGGAUCUACACGCUCAGACUCAUUCCAACUCCUAACCCUCAUCUCGACGCUAUCCGUCGUCCGUCACUCCGUACCAUGACGAGCAAUGCUUACCCUGGCCUGAGACACUUAAAUCCAUGUCUGUUGGCCUACGCUAGUAUCCGUACGAGGCCGAUCAAGAGUAGUGCUAUUUUAAACUACUCUAAGGAAGCUCUGCUGCAACCUUUUAAUUGGAAGCCGUCUUACGUAGCAGGGGCGGGCCACAUCGGAAUAAGGACCAUCUCCCUAUUUAAAUCAGAUUGCAUUCCAAAACACCGGGGAGCGGUCCUGACCGAGUCGCCAUGGUUAUACAAGAGCCAUUUCCAGACCGGAAGAGCAGCGUUCGAUCUGGGCCCGGCAUCAAUCGCCGCGGAAUAUCCGGAGGAAACGCUUGAUGUUAAGUUAGAAACAUUUAACCUACGGGAGGUCUCGCGUGGACUAUUGCGAUCGCUCUUGUAUAGUUCAGGGAGUUAUGAACACCAUGUGGCACGGGCCAAACUACAAGAAAACUCAGAGCACAACCCGCCCACCUUAGGAUCGGGUCGACGCAUAAAAUACCGCUGCAAGUCGAAACUCCACGCCCUGACGAAUCUGUGCUCUUUUACAGAAUGCGUCUCCCAUAGGUAUCCAAGUGAGCCUUCUGCACUAAUGUCUUGCCCGUGCGUUUCGUUUAUAAAAACAUCACUAAGACCGCUUAGUCAGAUCUGCAGGAAUGCUGGUGAAACUGCGUUAAUAUACUUACAUGAGUUGUCCGGCACCGACUUGUCUUUGUUUGAUGAGUACAACCCUAGGCAAUUACGAUUAAGGGAAGGUCAGUACUGCGUUGCACCGGUAGAACGCCGCGCAAACAUCACGAAUGACAGAAGGUUUUCAUAUUCCGGGGUAAUUGCUAAUCUAUCUAGGUGCUCCGCCGGGAACCCUCAAGCCGAGUGUUUCUCACCGCCAAAUAGGUCGCGCGCUAAAGAUUCGGUCCGUCACAGUCGCCUCCUUGCGAGAGGAAUACUGAGAGAUUGCAGCAUUGCGCACAGGCACGAAGUAGUACUUACCAGCGCAGAUCAAAUGCAUAUCAGCAUAAGGACAACGUCACUGUCAUAUCAGAACGCAGUGACAGCACCGGACCCACCGUGCAGUGGAAGCCCGGCGUUAACAUUCUAUAAGUCAUAUAUGCAGCCGCCAGAUUUUGAACAAAUAUAUGUUAUACUUCCGCCCCCUCACUAUACCAUGCCGAUGACAGGAGGCCCAUCUCUGUGUCAUUGGAUCCGACGGACUCAGCAGGCUAGUGUGUGUUGUCUAGGUAGGGUUGUACCGACGGCAAUCUCAGGAAAGGCUAGCUCCCGUGCGGUGAAGCGCAUCAGAAUAGUCGGGCGGCUUCCGCGCAGAACCACAUUCGUGGAGGAUCCAAGAAGGACUAGGGGAAUGACGGAUACUAUUCUCUUUAAUCUCCAAACUAGCUAUGGAGUGCUAGGGACCGAUCGGAGGAAACCUUGCGAAAGAGUAAGUGUCCGCCAAGGUUUUGACUGUCUUUAUGACUUCACAGAUUCGUGCAACGGCACCCCUUGCAACCAUGGGUUGGGAGUCGAUCUAGCGGCUUUCAAAGUAUGCAGUAAGGGUAGCCAUGAGAUUGAAAAUGCGCGGUGUCGAUACCCGGGGACUACAACCUGUAGGACGCUACGUAGUGCGCGUCACCCUCGGGGUACCAAGUGCCGUACUGCACGCCGGGGGGUCCCUGCGUCGACCGACCUUCGAACCGGAAUCGCCAAGACUCUACGUGAACCCACUUCAGUUGACGGCCGAGAGAACGGAAGUGGGCGGACAGCAGAAUGUGACAACGACCUAGCGUGUAUCACGGAAGCGAGGACGGUCAGGGAAUUGAAACAUCACCUUAAUAUCCCCUGGAAUCUGAUGGGGUUGAAUUUUGACGUUUUAUGCACUCUAAGGGUAUACAGCAUGGUAAAAACGAGCAGGAUUGUGACGGAGGUCUAUAGAUUUCGACGUACGCCUUUACAUAAACCCGUGCUCACACAGUGCAGUUUGACAUAUUCUGCAGCCUCGGCAUCUCGAGAGAGUUUUUGCGAUGACUACGUGGACGGUGGCGCACGAAUUUGUCAGACGCAUAAAGCCCGUCGGACAGUGGCCAUAGAACCUACGUUACGUGCGCCAGUAAAUAUGUGGGUCGAUGUAUUCUUACCUGGUAGCAGCACACGUGAAACUGGUGGCCUAUCCCCAGGUCAGGGAGAGGCAACUAUCAAGUUUGGAGAGGCCCAUGUCGAUUAUAACUCGCCGCCAUCGCCACCACAUUUUAAAAAUCUCAGGGCAGCACCAGAGGGGUAUUCCUCCCAACCGUUAGGAUUAAUACGAUUCGGGCCUAGUAACAAUUCACGGCUGGCGGGUGACAAUCUACUAACGAUUGCCAUGCGAGUCAAUCGACGCGACCAGGUACUACCCAACAUGUGGGCACGAAACUUCAAGAUUGACCCUUCAGUAGAAGCUUUACACAACCAUCCUUCAUAUGCAGCUUAUCGGAGCGCAUCUAACAACUCUAAUGGGGAGCUGUUUAUGCUUACGCAAGUGCGAGAUCUAUUGCACGGGCGAUUGGAUGUCGAACAGGAUGCUGCGAAGCAUGUAAACCGUCGUGACGACCGUCAAGAGUGUAAAUUCGACACCUGUAGUCGUCGAGAGCUUAUGGCAUGGUGUUCACCUGAUCGCCGCCAUCCCCGUCCAGUCCCUCGCAUCCCUACAAAAGCCCAGGAAAGCCAAAAUCUACACGACUCUACCGUGUGUACAGUAGCGUUGUGUGACUCACAAGGCGAGGUGGCUGGCAUAUCGAUACUGAACCGAAAUAAACAACAGCGGAGUCAUGUGGCGCAGCAUACUCCUGUAAUGCUUGGGUCUGGGUGGUCUACUGAUCAAGGAGACGACCGUGAACCAGGGCUGCCAACGGUUCCUAUGGGACUGAACAUUAGAGCCAAUGCCCUAAGGUACUUUAGUAUGCUUGGGUAUCCGUUCUCGAGACGUGGUCGACAUCCUCUUAGUGCUCUCUUGGGACGCCCAAAAUCUCUCCGAGUGAAGGGUAAUAUUUCCAGUUCUUCUUCGAGGAUGACUCCCUGUUAUGGCGGGUCUCGCCCUUUUUGCUGUUUGCAAACAGAAUUCCGGAGCUUUCAUGUUCCCUUUCUAACACCUACUUUCCUCAGUUACUACGUAGGAACGAAAGUUGGCGUGCCACCUAACUACUUGGAGGAAGGCGUAUCACACGCGUCUUAUGGAAAUCAUGGUGUUCCACUAGAACGAUUCUUUCACCCACAUUAG'
inputRNA1 = 'AUGGCCAUGGCGCCCAGAACUGA\nGAUCAAUAGUACCCGUAUUAACGGGUGA'
replaceCodons(inputRNA)