From 05f6bf51459e14179c649d63fac3b63fe0fbac67 Mon Sep 17 00:00:00 2001 From: bastien Date: Mon, 19 Sep 2016 17:57:50 +0200 Subject: [PATCH] bioinfo/Meme_suite: fixed meme-chip options - missing output directory option - disabled -meme-p option because of #14, because mpi-run refuses to run as root --- lib/bioinfo/meme_suite.ml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/lib/bioinfo/meme_suite.ml b/lib/bioinfo/meme_suite.ml index 6c45a655..28aacf94 100644 --- a/lib/bioinfo/meme_suite.ml +++ b/lib/bioinfo/meme_suite.ml @@ -11,7 +11,8 @@ let meme_chip ?meme_nmotifs ?meme_minw ?meme_maxw ?np fa = option (opt "-meme-nmotifs" int) meme_nmotifs ; option (opt "-meme-minw" int) meme_minw ; option (opt "-meme-maxw" int) meme_maxw ; - opt "-meme-p" ident Bistro.EDSL.np ; + (*opt "-meme-p" ident Bistro.EDSL.np ;*) + opt "--oc" ident dest ; dep fa ; ] ]