Dependency Dashboard

[renovate]

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.

Config Migration Needed

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Detected dependencies

docker-compose

docker-compose.yml

dockerfile

Dockerfile

• bioconductor/bioconductor_docker 3.19-R-4.4.0

github-actions

.github/workflows/R-CMD-check.yaml

• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2

.github/workflows/archive-github-pages.yml

.github/workflows/clear-cache.yml

• actions/github-script v7

.github/workflows/docker.yml

• actions/cache v4
• docker/metadata-action v5
• docker/setup-qemu-action v3
• docker/setup-buildx-action v3
• docker/#-action v3
• docker/build-push-action v6
• actions/upload-artifact v4
• actions/cache v4
• docker/metadata-action v5
• docker/setup-qemu-action v3
• docker/setup-buildx-action v3
• docker/#-action v3
• docker/build-push-action v6
• actions/upload-artifact v4
• actions/download-artifact v4
• docker/setup-buildx-action v3
• docker/metadata-action v5
• docker/#-action v3

.github/workflows/external-use.yaml

• actions/checkout v4
• SimenB/github-actions-cpu-cores v2
• r-lib/actions v2

.github/workflows/mega-linter.yml

• actions/checkout v4
• oxsecurity/megalinter v8
• actions/upload-artifact v4

.github/workflows/pkgdown.yaml

• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2
• JamesIves/github-pages-deploy-action v4.6.8

.github/workflows/pr-commands.yaml

• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2
• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2
• r-lib/actions v2

.github/workflows/r-license-report.yml

• actions/checkout v4
• insightsengineering/r-license-report v1

.github/workflows/remove-old-artifacts.yml

• c-hive/gha-remove-artifacts v1

.github/workflows/test-coverage.yaml

• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2
• codecov/codecov-action v4
• actions/upload-artifact v4

.github/workflows/update-citation-cff.yaml

• actions/checkout v4
• r-lib/actions v2
• r-lib/actions v2

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