.build.yml

# SPDX-FileCopyrightText: 2015-2023 Tanguy Fardet
# SPDX-License-Identifier: CC0-1.0

image: ubuntu/lts
sources:
    - https://git.sr.ht/~tfardet/NNGT
packages:
    - python3-pip
secrets:
    - ceb490c3-68b4-41f7-9aa9-eb2e4b91d424
    - 0b249c79-8eaf-4b82-b1d1-f3c38c7eae4b
    - 3a7c042a-24d8-4f53-b75c-f061f7517b65
tasks:
    - check: |
        export PATH="/home/build/.local/bin:$PATH"
        cd NNGT
        python3 extra/check_headers.py
        pip3 install reuse
        reuse lint
    - setup: |
        sudo apt install -y software-properties-common
        sudo sh -c 'echo -n "deb https://downloads.skewed.de/apt jammy main\n" >> /etc/apt/sources.list'
        sudo apt-key adv --keyserver keys.openpgp.org --recv-key 612DEFB798507F25
        sudo add-apt-repository -y ppa:nest-simulator/nest
        sudo apt-get update -qq
        sudo apt install -y gcc python3-dev libgeos-dev proj-bin libproj-dev openmpi-bin libopenmpi-dev libgmp-dev nest
        sudo apt install -y python3-pip python3-tk libigraph-dev python3-graph-tool python3-cairo python3-cairocffi
        pip3 install --upgrade pip setuptools
        pip install --upgrade numpy scipy cython mpi4py
        pip install --upgrade "networkx>=2.4" python-igraph
        pip install --upgrade "matplotlib<3.7" seaborn shapely svg.path dxfgrabber cartopy geopandas descartes lxml
        pip install --upgrade pytest pytest-mpi cov-core coverage coveralls[yaml]
        mv .coveralls.yml NNGT/.coveralls.yml || true
        cd NNGT
        pip install .
        echo 'export PATH=/home/build/.local/bin:$PATH' >> /home/build/.buildenv
    - test: |
        cd NNGT
        GL=all coverage run -p -m pytest testing/library_compatibility.py
        GL=gt coverage run -p -m pytest testing
        GL=nx coverage run -p -m pytest testing
        GL=ig coverage run -p -m pytest testing
        GL=nngt coverage run -p -m pytest testing
        GL=ig OMP=2 PYNEST_QUIET=1 coverage run -p -m pytest testing
        GL=gt OMP=0 MPI=1 mpirun -n 2 coverage run -p -m pytest --with-mpi testing
        coverage combine
        GIT_BRANCH=$(git show -s --pretty=%D HEAD | tr -s ', /' '\n' | grep -v HEAD | sed -n 2p)
        CI_NAME=$BUILD_SUBMITTER CI_BUILD_NUMBER=$JOB_ID CI_BUILD_URL=$JOB_URL CI_BRANCH=$GIT_BRANCH coveralls || true
    - doc: |
        cd NNGT
        GIT_BRANCH=$(git show -s --pretty=%D HEAD | tr -s ', /' '\n' | grep -v HEAD | sed -n 2p)
        set +x
        . ~/.rtd_nngt
        if [ "$GIT_BRANCH" == "main" ]; then curl -X POST -d "branches=main" -d "token=$rtd_nngt_token" https://readthedocs.org/api/v2/webhook/nngt/214030/; fi
        set -x