Error in running "run_sequentially.py" "1"

[Fariba2012]

Hi support team,

I am trying to run: python run__sequentially.py" "1" using the docker but I am getting the following error and couldnt solve it. how can I proceed?

(base) D:\TVB\connectivity\tvb-recon>docker run -it -v D:/TVB/connectivity/tvb-recon/TVB_patients/:/home/submitter/data -v D:/TVB/connectivity/tvb-recon/:/opt/tvb-recon thevirtualbrain/tvb-recon /bin/bash
submitter@bfcd7c0961c0:/opt/tvb-recon$ sudo condor_master

We trust you have received the usual lecture from the local System
Administrator. It usually boils down to these three things:

#1) Respect the privacy of others.
#2) Think before you type.
#3) With great power comes great responsibility.

[sudo] password for submitter:
submitter@bfcd7c0961c0:/opt/tvb-recon$ condor_status
Name OpSys Arch State Activity LoadAv Mem ActvtyTime

slot1@bfcd7c0961c0 LINUX X86_64 Unclaimed Benchmar 0.110 496 0+00:00:04
slot2@bfcd7c0961c0 LINUX X86_64 Unclaimed Idle 0.000 496 0+00:00:05
slot3@bfcd7c0961c0 LINUX X86_64 Unclaimed Idle 0.000 496 0+00:00:06
slot4@bfcd7c0961c0 LINUX X86_64 Unclaimed Idle 0.000 496 0+00:00:07
Total Owner Claimed Unclaimed Matched Preempting Backfill

    X86_64/LINUX     4     0       0         4       0          0        0

           Total     4     0       0         4       0          0        0

submitter@bfcd7c0961c0:/opt/tvb-recon$ cd pegasus/
submitter@bfcd7c0961c0:/opt/tvb-recon/pegasus$ python run_sequentially.py "1"
Starting to process the following subjects: %s [1]
Starting to process the subject: TVB1
/home/submitter/data/TVB1/configs
Configured atlas default for patient inside folder /home/submitter/data/TVB1/configs
Checking currently running job ids...
Currently running job ids are: []
Starting pegasus run for subject: TVB1with atlas: default
: not founds.sh: 6: main_pegasus.sh:
main_pegasus.sh: 7: main_pegasus.sh: Bad substitution
: not founds.sh: 8: main_pegasus.sh:
/..n_pegasus.sh: 9: cd: can't cd to /opt/tvb-recon/pegasus
: not founds.sh: 10: main_pegasus.sh:
: not founds.sh: 11: main_pegasus.sh: pwd
: not founds.sh: 12: main_pegasus.sh:
bash: pegasus/generate_dax.sh: No such file or directory
: not founds.sh: 15: main_pegasus.sh:
Traceback (most recent call last):
File "/usr/bin/pegasus-graphviz", line 507, in
main()
File "/usr/bin/pegasus-graphviz", line 497, in main
dag = parse_daxfile(dagfile, options.files)
File "/usr/bin/pegasus-graphviz", line 225, in parse_daxfile
f = open(fname,"r")
IOError: [Errno 2] No such file or directory: '/home/submitter/data/TVB1/configs/dax/main_bnm.dax\r'
: not founds.sh: 18: main_pegasus.sh:
Error: dot: can't open /home/submitter/data/TVB1/configs/dax/main_bnm.dot
: not founds.sh: 21: main_pegasus.sh:
bash: pegasus/plan_dax.sh: No such file or directory
Checking currently running job ids...
Currently running job ids are: []
Traceback (most recent call last):
File "run_sequentially.py", line 187, in
current_job_id = new_job_ids[0]
IndexError: list index out of range
submitter@bfcd7c0961c0:/opt/tvb-recon/pegasus$

thank you for your help and support.