Aligns short reads using dynamic seed size with strobemers
-
Updated
Feb 25, 2025 - C++
#
short-read-mapping
Here are 4 public repositories matching this topic...
BWA-MEME: Faster BWA-MEM2 using learned-index
machine-learning bioinformatics genomics ngs bwa-mem alignment-algorithm learned-index bwa-mem2 short-read-mapping bwa-meme
-
Updated
Jul 1, 2024 - C++
Implementation of BucketMap, a novel cache-efficient, bit-parallel and alignment-free short read mapping algorithm.
-
Updated
Apr 23, 2024 - C++
Whisper 2: indel-sensitive short read mapping. To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711021000376
-
Updated
Apr 14, 2021 - C++
Improve this page
Add a description, image, and links to the short-read-mapping topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the short-read-mapping topic, visit your repo's landing page and select "manage topics."