diff --git a/man/misc/vsearch-pairwise_alignment_parameters.7.md b/man/misc/vsearch-pairwise_alignment_parameters.7.md index 5a5abe60..1417c1bb 100644 --- a/man/misc/vsearch-pairwise_alignment_parameters.7.md +++ b/man/misc/vsearch-pairwise_alignment_parameters.7.md @@ -17,7 +17,7 @@ algorithm finds the pairwise alignment with the best score. (explain the difference with Smith-Waterman?) Along the pairwise alignment, each aligned position contributes to the -score, by being either a *match*, a *mismatch*, or a *gap*. +score, by being either a *match*, a *mismatch*, or a *gap*. ## match and mismatches