Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[Unreleased]

0.6.1 - 2024-05-22

Other

major dep updates, rustls 0.21 -> 0.23, http 0.2 -> 1, reqwest 0.11 -> 0.12, noodles 0.65 -> 0.74 + minor bumps for other crates depending on these.
Merge branch 'main' of https://github.com/umccr/htsget-rs into mio_h2_bump

0.6.0 - 2024-05-19

Fixed

(test) remove unused feature flag

Other

update MSRV
(refactor) convert unwraps to Results inside concat module
(search) additional chr11 and chr20 byte ranges tests for bam and cram
all range tests now concatenate bytes, update CRAM files
Merge branch 'main' of https://github.com/umccr/htsget-rs into test/concat-responses
(deps) update noodles to 0.65

0.5.4 - 2024-01-02

Other

(deps) further minor dependency changes
(deps) update noodles to 0.60, new clippy warnings

0.5.3 - 2023-11-02

Other

updated the following local packages: htsget-config

0.5.2 - 2023-09-06

Fixed

(test) http-tests feature should include htsget-config dependency

Other

(deps) properly update noodles and aws dependencies
(deps) update msrv and attempt using htsget-test as a dev dependency
bump deps including rustls 0.21
Merge branch 'main' of https://github.com/umccr/htsget-rs into feat/htsget-elsa

0.5.1 - 2023-09-05

Other

bump up deploy packages, also solves CVE-2023-35165 and CVE-2022-25883

0.5.0 - 2023-07-11

Added

[breaking] implement client tls config
[breaking] add server config to certificate key pair
[breaking] add stronger types for certificate key pairs
introduce cert and key parsing into config

0.4.4 - 2023-06-20

Other

bump deps

0.4.3 - 2023-06-19

Other

updated the following local packages: htsget-config

0.4.2 - 2023-06-08

Other

remove unused dependencies and update msrv
update remaining dependencies, hold back tokio-rustls due to conflicting versions with actix-web
update noodles, remove repeated code in search

0.4.1 - 2023-06-02

Other

updated the following local packages: htsget-config

0.3.0 - 2023-05-29

Added

(config) add url-storage feature flag
add option to format logs in different styles
add error type to config
[breaking] add tls config to ticket server, rearrange some fields
(test) add multiple resolvers for server tests and test resolution
use serve_at in data server rather than a constant
(config) add automatic config inference for local and s3 storage, and rearrange modules
[breaking] simplify storage config by allowing untagged enum representation

Fixed

inserting keys with the same name multiple times into headers serializes correctly
[breaking] headers should allow multiple values for the same key
use correct help context for a crate using htsget-config
(release) Bump all crates to 0.1.2 as explored in release-plz/release-plz#507 (comment)

Other

update for UrlStorage
[breaking] rename AwsS3Storage to S3Storage in search
remove s3-storage as default
Merge branch 'main' of https://github.com/umccr/htsget-rs into feat/actix-tls
[breaking] move htsget structs to config, and resolve storage type in config
manually bump crate versions to 0.1.4
bump crate versions to 0.1.3 manually
allow htsget-test to be published and bump deps
(test) remove htsget-test dependence on htsget-search and htsget-http.
[breaking] move CertificateKeyPair to config to simplify data server logic
release
Downgrade release after fixing cargo publish circular dep issues as discussed in release-plz/release-plz#507 (comment)
Update cargo files (#152)
(deps) bump tokio from 1.24.0 to 1.24.2 (#151)
(fix) Remove version from htsget-test and mark it for publish=false to avoid circular dependency as recommended by @Marcoleni in release-plz/release-plz#452 (comment)
release (#148)
Set MSRV on all sub-crates (#146)
Better CI (#98)

0.2.0 - 2023-04-28

Added

(test) add multiple resolvers for server tests and test resolution
use serve_at in data server rather than a constant
(config) add automatic config inference for local and s3 storage, and rearrange modules
[breaking] simplify storage config by allowing untagged enum representation

Other

[breaking] move htsget structs to config, and resolve storage type in config

0.1.1 - 2023-01-27

Other

Set MSRV on all sub-crates (#146)