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Tracking software versions in Docker images #416

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rcannood opened this issue May 8, 2023 · 3 comments
Open

Tracking software versions in Docker images #416

rcannood opened this issue May 8, 2023 · 3 comments
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design enhancement New feature or request

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@rcannood
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rcannood commented May 8, 2023 •
edited
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I was experimenting with listing version numbers of Docker images so they can be documented. For reference, I used the following code:

docker_pkg_version <- function(container_id) {
  # Commands to detect package versions
  commands <- list(
    apt = "dpkg-query --showformat='${Package} ${Version}\\n' --show",
    apk = "apk info --all | grep -e ^P -e ^V | awk 'NR%2{printf \"%s \", $0; next} 1'",
    yum = "yum list installed | awk 'NR>1 {print $1, $2}'",
    r_packages = "Rscript -e 'installed.packages()[,c(1,3)]'",
    python_packages = "pip freeze"
  )

  # Execute the commands inside the Docker container and store the results
  package_versions <- lapply(commands, function(command) {
    tryCatch({
      docker_command <- paste("docker run", container_id, command)
      system(docker_command, intern = TRUE, ignore.stderr = TRUE)
    }, error = function(e) {
      character(0)
    })
  })

  # Print the detected package versions
  names(package_versions) <- names(commands)

  package_versions
}

This could be executed immediately after a Docker image has been built (maybe not by default, but definitely during a main_build and a release). This information could then be stored inside the viash config.

Additionally, we should add a way for adding versions of custom cli tools, such as:

resources:
  - type: bash_script
    path: script.sh
    usage: main
  - type: bash_script
    path: version.sh
    usage: version
test_resources:
  - type: bash_script
    path: test.sh
    usage: test

(Would need to find a better name for 'usage')

With version.sh:

cellranger --version
viash -v | awk '{print $1, $2}'
@rcannood rcannood added the enhancement New feature or request label May 8, 2023
@rcannood rcannood mentioned this issue May 23, 2023
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@rcannood rcannood changed the title Tracking software versions Tracking software versions in Docker images Jul 11, 2023
@rcannood
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rcannood commented Jul 11, 2023 •
edited
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@DriesSchaumont noted that we can use https://docs.docker.com/engine/sbom/ for this, which seems like a great solution to the problem!

Caveats

  • It still can't detect custom software
    Example: CellRanger in docker sbom ghcr.io/openpipelines-bio/mapping_cellranger_multi:0.9.0
  • It also doesn't detect R packages
    Example: docker sbom ghcr.io/openpipelines-bio/process_10xh5_filter_10xh5:0.9.0
    Maybe I just need to update syft → feat: Add R cataloger anchore/syft#1790

@rcannood
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Indeed, with a newer version of Syft, the R packages do show up.

syft ghcr.io/openpipelines-bio/process_10xh5_filter_10xh5:0.9.0
Output 
 ✔ Loaded image            
 ✔ Parsed image            
 ✔ Cataloged packages      [480 packages]

NAME                       VERSION                                  TYPE      
KernSmooth                 2.23-20                                  R-package  
MASS                       7.3-59                                   R-package  
Matrix                     1.5-4                                    R-package  
Pillow                     9.5.0                                    python     
PyGObject                  3.42.1                                   python     
R6                         2.5.1                                    R-package  
Rcpp                       1.0.10                                   R-package  
RcppTOML                   0.2.2                                    R-package  
adduser                    3.118ubuntu5                             deb        
anndata                    0.7.5.6                                  R-package  
anndata                    0.8.0                                    python     
apt                        2.4.8                                    deb        
assertthat                 0.2.1                                    R-package  
base                       4.3.0                                    R-package  
base-files                 12ubuntu4.2                              deb        
base-passwd                3.5.52build1                             deb        
bash                       5.1-6ubuntu1                             deb        
binutils                   2.38-4ubuntu2.1                          deb        
binutils-common            2.38-4ubuntu2.1                          deb        
binutils-x86-64-linux-gnu  2.38-4ubuntu2.1                          deb        
bit                        4.0.5                                    R-package  
bit64                      4.0.5                                    R-package  
boot                       1.3-28.1                                 R-package  
brio                       1.1.3                                    R-package  
bsdutils                   1:2.37.2-4ubuntu3                        deb        
bspm                       0.5.1                                    R-package  
build-essential            12.9ubuntu3                              deb        
bzip2                      1.0.8-5build1                            deb        
ca-certificates            20211016ubuntu0.22.04.1                  deb        
callr                      3.7.3                                    R-package  
class                      7.3-21                                   R-package  
cli                        3.6.1                                    R-package  
cluster                    2.1.4                                    R-package  
codetools                  0.2-19                                   R-package  
compiler                   4.3.0                                    R-package  
contourpy                  1.1.0                                    python     
coreutils                  8.32-4.1ubuntu1                          deb        
cpp                        4:11.2.0-1ubuntu1                        deb        
cpp-11                     11.3.0-1ubuntu1~22.04                    deb        
crayon                     1.5.2                                    R-package  
cycler                     0.11.0                                   python     
dash                       0.5.11+git20210903+057cd650a4ed-3build1  deb        
datasets                   4.3.0                                    R-package  
dbus-python                1.2.18                                   python     
debconf                    1.5.79ubuntu1                            deb        
debianutils                5.5-1ubuntu2                             deb        
desc                       1.4.2                                    R-package  
diffobj                    0.3.5                                    R-package  
diffutils                  1:3.8-0ubuntu2                           deb        
digest                     0.6.31                                   R-package  
distro-info-data           0.52ubuntu0.3                            deb        
docopt                     0.7.1                                    R-package  
dpkg                       1.21.1ubuntu2.1                          deb        
dpkg-dev                   1.21.1ubuntu2.1                          deb        
e2fsprogs                  1.46.5-2ubuntu1.1                        deb        
ellipsis                   0.3.2                                    R-package  
evaluate                   0.21                                     R-package  
fansi                      1.0.4                                    R-package  
findutils                  4.8.0-1ubuntu3                           deb        
fontconfig                 2.13.1-4.2ubuntu5                        deb        
fontconfig-config          2.13.1-4.2ubuntu5                        deb        
fonts-dejavu-core          2.37-2build1                             deb        
fonttools                  4.40.0                                   python     
foreign                    0.8-84                                   R-package  
fs                         1.6.2                                    R-package  
g++                        4:11.2.0-1ubuntu1                        deb        
g++-11                     11.3.0-1ubuntu1~22.04                    deb        
gcc                        4:11.2.0-1ubuntu1                        deb        
gcc-11                     11.3.0-1ubuntu1~22.04                    deb        
gcc-11-base                11.3.0-1ubuntu1~22.04                    deb        
gcc-12-base                12.1.0-2ubuntu1~22.04                    deb        
gfortran                   4:11.2.0-1ubuntu1                        deb        
gfortran-11                11.3.0-1ubuntu1~22.04                    deb        
gir1.2-glib-2.0            1.72.0-1                                 deb        
glue                       1.6.2                                    R-package  
gpgv                       2.2.27-3ubuntu2.1                        deb        
grDevices                  4.3.0                                    R-package  
graphics                   4.3.0                                    R-package  
grep                       3.7-1build1                              deb        
grid                       4.3.0                                    R-package  
gzip                       1.10-4ubuntu4.1                          deb        
h5py                       3.8.0                                    python     
hdf5-helpers               1.10.7+repack-4ubuntu2                   deb        
hdf5r                      1.3.8                                    R-package  
here                       1.0.1                                    R-package  
hostname                   3.23ubuntu2                              deb        
icu-devtools               70.1-2                                   deb        
init-system-helpers        1.62                                     deb        
joblib                     1.2.0                                    python     
jsonlite                   1.8.5                                    R-package  
kiwisolver                 1.4.4                                    python     
lattice                    0.21-8                                   R-package  
libacl1                    2.3.1-1                                  deb        
libaec-dev                 1.0.6-1                                  deb        
libaec0                    1.0.6-1                                  deb        
libapt-pkg6.0              2.4.8                                    deb        
libasan6                   11.3.0-1ubuntu1~22.04                    deb        
libatomic1                 12.1.0-2ubuntu1~22.04                    deb        
libattr1                   1:2.5.1-1build1                          deb        
libaudit-common            1:3.0.7-1build1                          deb        
libaudit1                  1:3.0.7-1build1                          deb        
libbinutils                2.38-4ubuntu2.1                          deb        
libblas-dev                3.10.0-2ubuntu1                          deb        
libblas3                   3.10.0-2ubuntu1                          deb        
libblkid1                  2.37.2-4ubuntu3                          deb        
libbrotli1                 1.0.9-2build6                            deb        
libbsd0                    0.11.5-1                                 deb        
libbz2-1.0                 1.0.8-5build1                            deb        
libbz2-dev                 1.0.8-5build1                            deb        
libc-bin                   2.35-0ubuntu3.1                          deb        
libc-dev-bin               2.35-0ubuntu3.1                          deb        
libc6                      2.35-0ubuntu3.1                          deb        
libc6-dev                  2.35-0ubuntu3.1                          deb        
libcairo2                  1.16.0-5ubuntu2                          deb        
libcap-ng0                 0.7.9-2.2build3                          deb        
libcap2                    1:2.44-1build3                           deb        
libcc1-0                   12.1.0-2ubuntu1~22.04                    deb        
libcom-err2                1.46.5-2ubuntu1.1                        deb        
libcrypt-dev               1:4.4.27-1                               deb        
libcrypt1                  1:4.4.27-1                               deb        
libctf-nobfd0              2.38-4ubuntu2.1                          deb        
libctf0                    2.38-4ubuntu2.1                          deb        
libcurl4                   7.81.0-1ubuntu1.10                       deb        
libcurl4-openssl-dev       7.81.0-1ubuntu1.10                       deb        
libdatrie1                 0.2.13-2                                 deb        
libdb5.3                   5.3.28+dfsg1-0.8ubuntu3                  deb        
libdbus-1-3                1.12.20-2ubuntu4.1                       deb        
libdebconfclient0          0.261ubuntu1                             deb        
libdeflate0                1.10-2                                   deb        
libdpkg-perl               1.21.1ubuntu2.1                          deb        
libexpat1                  2.4.7-1ubuntu0.2                         deb        
libexpat1-dev              2.4.7-1ubuntu0.2                         deb        
libext2fs2                 1.46.5-2ubuntu1.1                        deb        
libffi8                    3.4.2-4                                  deb        
libfontconfig1             2.13.1-4.2ubuntu5                        deb        
libfreetype6               2.11.1+dfsg-1ubuntu0.1                   deb        
libfribidi0                1.0.8-2ubuntu3.1                         deb        
libgcc-11-dev              11.3.0-1ubuntu1~22.04                    deb        
libgcc-s1                  12.1.0-2ubuntu1~22.04                    deb        
libgcrypt20                1.9.4-3ubuntu3                           deb        
libgdbm-compat4            1.23-1                                   deb        
libgdbm6                   1.23-1                                   deb        
libgfortran-11-dev         11.3.0-1ubuntu1~22.04                    deb        
libgfortran5               12.1.0-2ubuntu1~22.04                    deb        
libgirepository-1.0-1      1.72.0-1                                 deb        
libglib2.0-0               2.72.4-0ubuntu2                          deb        
libgmp10                   2:6.2.1+dfsg-3ubuntu1                    deb        
libgnutls30                3.7.3-4ubuntu1.1                         deb        
libgomp1                   12.1.0-2ubuntu1~22.04                    deb        
libgpg-error0              1.43-3                                   deb        
libgraphite2-3             1.3.14-1build2                           deb        
libgssapi-krb5-2           1.19.2-2                                 deb        
libharfbuzz0b              2.7.4-1ubuntu3.1                         deb        
libhdf5-103-1              1.10.7+repack-4ubuntu2                   deb        
libhdf5-cpp-103-1          1.10.7+repack-4ubuntu2                   deb        
libhdf5-dev                1.10.7+repack-4ubuntu2                   deb        
libhdf5-fortran-102        1.10.7+repack-4ubuntu2                   deb        
libhdf5-hl-100             1.10.7+repack-4ubuntu2                   deb        
libhdf5-hl-cpp-100         1.10.7+repack-4ubuntu2                   deb        
libhdf5-hl-fortran-100     1.10.7+repack-4ubuntu2                   deb        
libhogweed6                3.7.3-1build2                            deb        
libice6                    2:1.0.10-1build2                         deb        
libicu-dev                 70.1-2                                   deb        
libicu70                   70.1-2                                   deb        
libidn2-0                  2.3.2-2build1                            deb        
libisl23                   0.24-2build1                             deb        
libitm1                    12.1.0-2ubuntu1~22.04                    deb        
libjbig0                   2.1-3.1ubuntu0.22.04.1                   deb        
libjpeg-dev                8c-2ubuntu10                             deb        
libjpeg-turbo8             2.1.2-0ubuntu1                           deb        
libjpeg-turbo8-dev         2.1.2-0ubuntu1                           deb        
libjpeg8                   8c-2ubuntu10                             deb        
libjpeg8-dev               8c-2ubuntu10                             deb        
libjs-jquery               3.6.0+dfsg+~3.5.13-1                     deb        
libjs-sphinxdoc            4.3.2-1                                  deb        
libjs-underscore           1.13.2~dfsg-2                            deb        
libk5crypto3               1.19.2-2                                 deb        
libkeyutils1               1.6.1-2ubuntu3                           deb        
libkrb5-3                  1.19.2-2                                 deb        
libkrb5support0            1.19.2-2                                 deb        
liblapack-dev              3.10.0-2ubuntu1                          deb        
liblapack3                 3.10.0-2ubuntu1                          deb        
libldap-2.5-0              2.5.14+dfsg-0ubuntu0.22.04.2             deb        
liblsan0                   12.1.0-2ubuntu1~22.04                    deb        
liblz4-1                   1.9.3-2build2                            deb        
liblzma-dev                5.2.5-2ubuntu1                           deb        
liblzma5                   5.2.5-2ubuntu1                           deb        
libmd0                     1.0.4-1build1                            deb        
libmount1                  2.37.2-4ubuntu3                          deb        
libmpc3                    1.2.1-2build1                            deb        
libmpdec3                  2.5.1-2build2                            deb        
libmpfr6                   4.1.0-3build3                            deb        
libncurses-dev             6.3-2                                    deb        
libncurses5-dev            6.3-2                                    deb        
libncurses6                6.3-2                                    deb        
libncursesw6               6.3-2                                    deb        
libnettle8                 3.7.3-1build2                            deb        
libnghttp2-14              1.43.0-1build3                           deb        
libnsl-dev                 1.3.0-2build2                            deb        
libnsl2                    1.3.0-2build2                            deb        
libp11-kit0                0.24.0-6build1                           deb        
libpam-modules             1.4.0-11ubuntu2                          deb        
libpam-modules-bin         1.4.0-11ubuntu2                          deb        
libpam-runtime             1.4.0-11ubuntu2                          deb        
libpam0g                   1.4.0-11ubuntu2                          deb        
libpango-1.0-0             1.50.6+ds-2ubuntu1                       deb        
libpangocairo-1.0-0        1.50.6+ds-2ubuntu1                       deb        
libpangoft2-1.0-0          1.50.6+ds-2ubuntu1                       deb        
libpaper-utils             1.1.28build2                             deb        
libpaper1                  1.1.28build2                             deb        
libpcre16-3                2:8.39-13ubuntu0.22.04.1                 deb        
libpcre2-16-0              10.39-3ubuntu0.1                         deb        
libpcre2-32-0              10.39-3ubuntu0.1                         deb        
libpcre2-8-0               10.39-3ubuntu0.1                         deb        
libpcre2-dev               10.39-3ubuntu0.1                         deb        
libpcre2-posix3            10.39-3ubuntu0.1                         deb        
libpcre3                   2:8.39-13ubuntu0.22.04.1                 deb        
libpcre3-dev               2:8.39-13ubuntu0.22.04.1                 deb        
libpcre32-3                2:8.39-13ubuntu0.22.04.1                 deb        
libpcrecpp0v5              2:8.39-13ubuntu0.22.04.1                 deb        
libperl5.34                5.34.0-3ubuntu1.1                        deb        
libpixman-1-0              0.40.0-1ubuntu0.22.04.1                  deb        
libpng-dev                 1.6.37-3build5                           deb        
libpng16-16                1.6.37-3build5                           deb        
libprocps8                 2:3.3.17-6ubuntu2                        deb        
libpsl5                    0.21.0-1.2build2                         deb        
libpython3-dev             3.10.6-1~22.04                           deb        
libpython3-stdlib          3.10.6-1~22.04                           deb        
libpython3.10              3.10.6-1~22.04.2ubuntu1.1                deb        
libpython3.10-dev          3.10.6-1~22.04.2ubuntu1.1                deb        
libpython3.10-minimal      3.10.6-1~22.04.2ubuntu1.1                deb        
libpython3.10-stdlib       3.10.6-1~22.04.2ubuntu1.1                deb        
libquadmath0               12.1.0-2ubuntu1~22.04                    deb        
libreadline-dev            8.1.2-1                                  deb        
libreadline8               8.1.2-1                                  deb        
librtmp1                   2.4+20151223.gitfa8646d.1-2build4        deb        
libsasl2-2                 2.1.27+dfsg2-3ubuntu1.2                  deb        
libsasl2-modules-db        2.1.27+dfsg2-3ubuntu1.2                  deb        
libseccomp2                2.5.3-2ubuntu2                           deb        
libselinux1                3.3-1build2                              deb        
libsemanage-common         3.3-1build2                              deb        
libsemanage2               3.3-1build2                              deb        
libsepol2                  3.3-1build1                              deb        
libsm6                     2:1.2.3-1build2                          deb        
libsmartcols1              2.37.2-4ubuntu3                          deb        
libsqlite3-0               3.37.2-2ubuntu0.1                        deb        
libss2                     1.46.5-2ubuntu1.1                        deb        
libssh-4                   0.9.6-2build1                            deb        
libssl-dev                 3.0.2-0ubuntu1.10                        deb        
libssl3                    3.0.2-0ubuntu1.10                        deb        
libstdc++-11-dev           11.3.0-1ubuntu1~22.04                    deb        
libstdc++6                 12.1.0-2ubuntu1~22.04                    deb        
libsystemd0                249.11-0ubuntu3.6                        deb        
libsz2                     1.0.6-1                                  deb        
libtasn1-6                 4.18.0-4build1                           deb        
libtcl8.6                  8.6.12+dfsg-1build1                      deb        
libthai-data               0.1.29-1build1                           deb        
libthai0                   0.1.29-1build1                           deb        
libtiff5                   4.3.0-6ubuntu0.4                         deb        
libtinfo6                  6.3-2                                    deb        
libtirpc-common            1.3.2-2ubuntu0.1                         deb        
libtirpc-dev               1.3.2-2ubuntu0.1                         deb        
libtirpc3                  1.3.2-2ubuntu0.1                         deb        
libtk8.6                   8.6.12-1build1                           deb        
libtsan0                   11.3.0-1ubuntu1~22.04                    deb        
libubsan1                  12.1.0-2ubuntu1~22.04                    deb        
libudev1                   249.11-0ubuntu3.6                        deb        
libunistring2              1.0-1                                    deb        
libuuid1                   2.37.2-4ubuntu3                          deb        
libwebp7                   1.2.2-2                                  deb        
libx11-6                   2:1.7.5-1                                deb        
libx11-data                2:1.7.5-1                                deb        
libxau6                    1:1.0.9-1build5                          deb        
libxcb-render0             1.14-3ubuntu3                            deb        
libxcb-shm0                1.14-3ubuntu3                            deb        
libxcb1                    1.14-3ubuntu3                            deb        
libxdmcp6                  1:1.1.3-0ubuntu5                         deb        
libxext6                   2:1.3.4-1build1                          deb        
libxft2                    2.3.4-1                                  deb        
libxmuu1                   2:1.1.3-3                                deb        
libxrender1                1:0.9.10-1build4                         deb        
libxss1                    1:1.2.3-1build2                          deb        
libxt6                     1:1.2.1-1                                deb        
libxxhash0                 0.8.1-1                                  deb        
libzstd1                   1.4.8+dfsg-3build1                       deb        
lifecycle                  1.0.3                                    R-package  
linux-libc-dev             5.15.0-71.78                             deb        
littler                    0.3.18                                   R-package  
llvmlite                   0.40.1rc1                                python     
locales                    2.35-0ubuntu3.1                          deb        
login                      1:4.8.1-2ubuntu2                         deb        
logsave                    1.46.5-2ubuntu1.1                        deb        
lsb-base                   11.1.0ubuntu4                            deb        
lto-disabled-list          24                                       deb        
magrittr                   2.0.3                                    R-package  
make                       4.3-4.1build1                            deb        
matplotlib                 3.7.1                                    python     
mawk                       1.3.4.20200120-3                         deb        
media-types                7.0.0                                    deb        
methods                    4.3.0                                    R-package  
mgcv                       1.8-42                                   R-package  
mount                      2.37.2-4ubuntu3                          deb        
natsort                    8.3.1                                    python     
ncurses-base               6.3-2                                    deb        
ncurses-bin                6.3-2                                    deb        
networkx                   3.1                                      python     
nlme                       3.1-162                                  R-package  
nnet                       7.3-18                                   R-package  
numba                      0.57.0                                   python     
numpy                      1.24.3                                   python     
openssl                    3.0.2-0ubuntu1.9                         deb        
packaging                  23.1                                     python     
pandas                     2.0.2                                    python     
parallel                   4.3.0                                    R-package  
passwd                     1:4.8.1-2ubuntu2                         deb        
patch                      2.7.6-7build2                            deb        
patsy                      0.5.3                                    python     
perl                       5.34.0-3ubuntu1.1                        deb        
perl-base                  5.34.0-3ubuntu1.1                        deb        
perl-modules-5.34          5.34.0-3ubuntu1.1                        deb        
pillar                     1.9.0                                    R-package  
pip                        22.0.2                                   python     
pip                        23.1.2                                   python     
pkg-config                 0.29.2-1ubuntu3                          deb        
pkgconfig                  2.0.3                                    R-package  
pkgload                    1.3.2                                    R-package  
png                        0.1-8                                    R-package  
praise                     1.0.0                                    R-package  
processx                   3.8.1                                    R-package  
procps                     2:3.3.17-6ubuntu2                        deb        
ps                         1.7.5                                    R-package  
pynndescent                0.5.10                                   python     
pyparsing                  3.1.0                                    python     
python                     3.10.6                                   binary     
python-apt                 2.4.0+ubuntu1                            python     
python-apt-common          2.4.0ubuntu1                             deb        
python-dateutil            2.8.2                                    python     
python3                    3.10.6-1~22.04                           deb        
python3-apt                2.4.0ubuntu1                             deb        
python3-dbus               1.2.18-3build1                           deb        
python3-dev                3.10.6-1~22.04                           deb        
python3-distutils          3.10.6-1~22.04                           deb        
python3-gi                 3.42.1-0ubuntu1                          deb        
python3-lib2to3            3.10.6-1~22.04                           deb        
python3-minimal            3.10.6-1~22.04                           deb        
python3-pip                22.0.2+dfsg-1ubuntu0.3                   deb        
python3-pkg-resources      59.6.0-1.2ubuntu0.22.04.1                deb        
python3-setuptools         59.6.0-1.2ubuntu0.22.04.1                deb        
python3-wheel              0.37.1-2ubuntu0.22.04.1                  deb        
python3.10                 3.10.6-1~22.04.2ubuntu1.1                deb        
python3.10-dev             3.10.6-1~22.04.2ubuntu1.1                deb        
python3.10-minimal         3.10.6-1~22.04.2ubuntu1.1                deb        
pytz                       2023.3                                   python     
r-base                     4.3.0-1.2204.0                           deb        
r-base-core                4.3.0-1.2204.0                           deb        
r-base-dev                 4.3.0-1.2204.0                           deb        
r-cran-anndata             0.7.5.6-1.ca2204.1                       deb        
r-cran-assertthat          0.2.1-1.ca2204.1                         deb        
r-cran-bit                 4.0.5-1.ca2204.1                         deb        
r-cran-bit64               4.0.5-1.ca2204.1                         deb        
r-cran-boot                1.3-28.1-1.ca2204.1                      deb        
r-cran-brio                1.1.3-1.ca2204.1                         deb        
r-cran-bspm                0.5.1-1.ca2204.1                         deb        
r-cran-callr               3.7.3-1.ca2204.1                         deb        
r-cran-class               7.3-21-1.ca2204.1                        deb        
r-cran-cli                 3.6.1-1.ca2204.1                         deb        
r-cran-cluster             2.1.4-1.ca2204.1                         deb        
r-cran-codetools           0.2-19-1.ca2204.1                        deb        
r-cran-crayon              1.5.2-1.ca2204.1                         deb        
r-cran-desc                1.4.2-1.ca2204.1                         deb        
r-cran-diffobj             0.3.5-1.ca2204.1                         deb        
r-cran-digest              0.6.31-1.ca2204.1                        deb        
r-cran-docopt              0.7.1-1.ca2204.1                         deb        
r-cran-ellipsis            0.3.2-1.ca2204.1                         deb        
r-cran-evaluate            0.21-1.ca2204.1                          deb        
r-cran-fansi               1.0.4-1.ca2204.1                         deb        
r-cran-foreign             0.8.84-1.ca2204.1                        deb        
r-cran-fs                  1.6.2-1.ca2204.1                         deb        
r-cran-glue                1.6.2-1.ca2204.1                         deb        
r-cran-hdf5r               1.3.8-1.ca2204.1                         deb        
r-cran-here                1.0.1-1.ca2204.1                         deb        
r-cran-jsonlite            1.8.5-1.ca2204.1                         deb        
r-cran-kernsmooth          2.23-20-1.ca2204.1                       deb        
r-cran-lattice             0.21-8-1.ca2204.1                        deb        
r-cran-lifecycle           1.0.3-1.ca2204.1                         deb        
r-cran-littler             0.3.18-1.ca2204.2                        deb        
r-cran-magrittr            2.0.3-1.ca2204.1                         deb        
r-cran-mass                7.3-59-1.ca2204.1                        deb        
r-cran-matrix              1.5-4-1.ca2204.1                         deb        
r-cran-mgcv                1.8-42-1.ca2204.1                        deb        
r-cran-nlme                3.1.162-1.ca2204.1                       deb        
r-cran-nnet                7.3-18-1.ca2204.1                        deb        
r-cran-pillar              1.9.0-1.ca2204.1                         deb        
r-cran-pkgconfig           2.0.3-1.ca2204.1                         deb        
r-cran-pkgload             1.3.2-1.ca2204.1                         deb        
r-cran-png                 0.1-8-1.ca2204.1                         deb        
r-cran-praise              1.0.0-1.ca2204.1                         deb        
r-cran-processx            3.8.1-1.ca2204.1                         deb        
r-cran-ps                  1.7.5-1.ca2204.1                         deb        
r-cran-r6                  2.5.1-1.ca2204.1                         deb        
r-cran-rappdirs            0.3.3-1.ca2204.1                         deb        
r-cran-rcpp                1.0.10-1.ca2204.1                        deb        
r-cran-rcpptoml            0.2.2-1.ca2204.1                         deb        
r-cran-rematch2            2.1.2-1.ca2204.1                         deb        
r-cran-remotes             2.4.2-1.ca2204.1                         deb        
r-cran-reticulate          1.30-1.ca2204.1                          deb        
r-cran-rlang               1.1.1-1.ca2204.1                         deb        
r-cran-rpart               4.1.19-1.ca2204.1                        deb        
r-cran-rprojroot           2.0.3-1.ca2204.1                         deb        
r-cran-spatial             7.3-16-1.ca2204.1                        deb        
r-cran-survival            3.5-5-1.ca2204.1                         deb        
r-cran-testthat            3.1.9-1.ca2204.1                         deb        
r-cran-tibble              3.2.1-1.ca2204.1                         deb        
r-cran-utf8                1.2.3-1.ca2204.1                         deb        
r-cran-vctrs               0.6.3-1.ca2204.1                         deb        
r-cran-waldo               0.5.1-1.ca2204.1                         deb        
r-cran-withr               2.5.0-1.ca2204.1                         deb        
r-recommended              4.3.0-1.2204.0                           deb        
rappdirs                   0.3.3                                    R-package  
readline-common            8.1.2-1                                  deb        
rematch2                   2.1.2                                    R-package  
remotes                    2.4.2                                    R-package  
reticulate                 1.30                                     R-package  
rlang                      1.1.1                                    R-package  
rpart                      4.1.19                                   R-package  
rpcsvc-proto               1.4.2-0ubuntu6                           deb        
rprojroot                  2.0.3                                    R-package  
scanpy                     1.9.3                                    python     
scikit-learn               1.2.2                                    python     
scipy                      1.10.1                                   python     
seaborn                    0.12.2                                   python     
sed                        4.8-1ubuntu2                             deb        
sensible-utils             0.0.17                                   deb        
session-info               1.0.0                                    python     
setuptools                 59.6.0                                   python     
six                        1.16.0                                   python     
spatial                    7.3-16                                   R-package  
splines                    4.3.0                                    R-package  
stats                      4.3.0                                    R-package  
stats4                     4.3.0                                    R-package  
statsmodels                0.14.0                                   python     
stdlib-list                0.8.0                                    python     
survival                   3.5-5                                    R-package  
sysvinit-utils             3.01-1ubuntu1                            deb        
tar                        1.34+dfsg-1build3                        deb        
tcltk                      4.3.0                                    R-package  
testRcppAttributePackage   1.0                                      R-package  
testRcppClass              0.1                                      R-package  
testRcppInterfaceExporter  0.1.0                                    R-package  
testRcppInterfaceUser      0.1.0                                    R-package  
testRcppModule             0.1                                      R-package  
testRcppPackage            0.1.0                                    R-package  
testthat                   3.1.9                                    R-package  
threadpoolctl              3.1.0                                    python     
tibble                     3.2.1                                    R-package  
tools                      4.3.0                                    R-package  
tqdm                       4.65.0                                   python     
translations               4.3.0                                    R-package  
tzdata                     2023.3                                   python     
tzdata                     2023c-0ubuntu0.22.04.1                   deb        
ubuntu-keyring             2021.03.26                               deb        
ucf                        3.0043                                   deb        
umap-learn                 0.5.3                                    python     
unzip                      6.0-26ubuntu3.1                          deb        
usrmerge                   25ubuntu2                                deb        
utf8                       1.2.3                                    R-package  
util-linux                 2.37.2-4ubuntu3                          deb        
utils                      4.3.0                                    R-package  
vctrs                      0.6.3                                    R-package  
waldo                      0.5.1                                    R-package  
wget                       1.21.2-2ubuntu1                          deb        
wheel                      0.37.1                                   python     
withr                      2.5.0                                    R-package  
x11-common                 1:7.7+23ubuntu2                          deb        
xauth                      1:1.1-1build2                            deb        
xdg-utils                  1.1.3-4.1ubuntu3~22.04.1                 deb        
xz-utils                   5.2.5-2ubuntu1                           deb        
zip                        3.0-12build2                             deb        
zlib1g                     1:1.2.11.dfsg-2ubuntu9.2                 deb        
zlib1g-dev                 1:1.2.11.dfsg-2ubuntu9.2                 deb

However it still doesn't detect CellRanger:

syft ghcr.io/openpipelines-bio/mapping_cellranger_multi:0.9.0
Output 
 ✔ Loaded image            
 ✔ Parsed image            
 ✔ Cataloged packages      [322 packages]
NAME                              VERSION                            TYPE         
Bottleneck                        1.3.4                              python        
Pillow                            9.0.1                              python        
adduser                           3.118ubuntu2                       deb           
alien                             8.95                               deb           
apt                               2.0.9                              deb           
autoconf                          2.69-11.1                          deb           
automake                          1:1.16.1-4ubuntu6                  deb           
autopoint                         0.19.8.1-10build1                  deb           
autotools-dev                     20180224.1                         deb           
base-files                        11ubuntu5.7                        deb           
base-passwd                       3.5.47                             deb           
bash                              5.0-6ubuntu1.2                     deb           
bcl2fastq2                        0v2.20.0.422-2                     deb           
binutils                          2.34-6ubuntu1.6                    deb           
binutils-common                   2.34-6ubuntu1.6                    deb           
binutils-x86-64-linux-gnu         2.34-6ubuntu1.6                    deb           
bsdmainutils                      11.1.2ubuntu3                      deb           
bsdutils                          1:2.34-0.1ubuntu9.4                deb           
build-essential                   12.8ubuntu1.1                      deb           
bzip2                             1.0.8-2                            deb           
ca-certificates                   20230311ubuntu0.20.04.1            deb           
certifi                           2021.10.8                          python        
coreutils                         8.30-3ubuntu2                      deb           
cpio                              2.13+dfsg-2ubuntu0.3               deb           
cpp                               4:9.3.0-1ubuntu2                   deb           
cpp-9                             9.4.0-1ubuntu1~20.04.1             deb           
curl                              7.68.0-1ubuntu2.18                 deb           
dash                              0.5.10.2-6                         deb           
dbus                              1.12.16-2ubuntu2.3                 deb           
debconf                           1.5.73                             deb           
debhelper                         12.10ubuntu1                       deb           
debianutils                       4.9.1                              deb           
debugedit                         4.14.2.1+dfsg1-1build2             deb           
dh-autoreconf                     19                                 deb           
dh-strip-nondeterminism           1.7.0-1                            deb           
diffutils                         1:3.7-3                            deb           
dirmngr                           2.2.19-3ubuntu2.2                  deb           
docopt                            0.6.2                              python        
dpkg                              1.19.7ubuntu3.2                    deb           
dpkg-dev                          1.19.7ubuntu3.2                    deb           
dwz                               0.13-5                             deb           
e2fsprogs                         1.45.5-2ubuntu1.1                  deb           
fakeroot                          1.24-1                             deb           
fdisk                             2.34-0.1ubuntu9.4                  deb           
file                              1:5.38-4                           deb           
findutils                         4.7.0-1ubuntu1                     deb           
g++                               4:9.3.0-1ubuntu2                   deb           
g++-9                             9.4.0-1ubuntu1~20.04.1             deb           
gcc                               4:9.3.0-1ubuntu2                   deb           
gcc-10-base                       10.3.0-1ubuntu1~20.04              deb           
gcc-9                             9.4.0-1ubuntu1~20.04.1             deb           
gcc-9-base                        9.4.0-1ubuntu1~20.04.1             deb           
gettext                                                              java-archive  
gettext                           0.19.8.1-10build1                  deb           
gettext-base                      0.19.8.1-10build1                  deb           
gnupg                             2.2.19-3ubuntu2.2                  deb           
gnupg-l10n                        2.2.19-3ubuntu2.2                  deb           
gnupg-utils                       2.2.19-3ubuntu2.2                  deb           
gpg                               2.2.19-3ubuntu2.2                  deb           
gpg-agent                         2.2.19-3ubuntu2.2                  deb           
gpg-wks-client                    2.2.19-3ubuntu2.2                  deb           
gpg-wks-server                    2.2.19-3ubuntu2.2                  deb           
gpgconf                           2.2.19-3ubuntu2.2                  deb           
gpgsm                             2.2.19-3ubuntu2.2                  deb           
gpgv                              2.2.19-3ubuntu2.2                  deb           
grep                              3.4-1                              deb           
groff-base                        1.22.4-4build1                     deb           
gzip                              1.10-0ubuntu4.1                    deb           
h5py                              3.6.0                              python        
hostname                          3.23                               deb           
init-system-helpers               1.57                               deb           
intltool-debian                   0.35.0+20060710.5                  deb           
joblib                            1.1.0                              python        
krb5-locales                      1.17-6ubuntu4.3                    deb           
libacl1                           2.2.53-6                           deb           
libalgorithm-diff-perl            1.19.03-2                          deb           
libalgorithm-diff-xs-perl         0.04-6                             deb           
libalgorithm-merge-perl           0.08-3                             deb           
libapparmor1                      2.13.3-7ubuntu5.2                  deb           
libapt-pkg6.0                     2.0.9                              deb           
libarchive-cpio-perl              0.10-1                             deb           
libarchive-zip-perl               1.67-2                             deb           
libarchive13                      3.4.0-2ubuntu1.2                   deb           
libasan5                          9.4.0-1ubuntu1~20.04.1             deb           
libasn1-8-heimdal                 7.7.0+dfsg-1ubuntu1.4              deb           
libassuan0                        2.5.3-7ubuntu2                     deb           
libatomic1                        10.3.0-1ubuntu1~20.04              deb           
libattr1                          1:2.4.48-5                         deb           
libaudit-common                   1:2.8.5-2ubuntu6                   deb           
libaudit1                         1:2.8.5-2ubuntu6                   deb           
libbinutils                       2.34-6ubuntu1.6                    deb           
libblkid1                         2.34-0.1ubuntu9.4                  deb           
libbrotli1                        1.0.7-6ubuntu0.1                   deb           
libbsd0                           0.10.0-1                           deb           
libbz2-1.0                        1.0.8-2                            deb           
libc-bin                          2.31-0ubuntu9.9                    deb           
libc-dev-bin                      2.31-0ubuntu9.9                    deb           
libc6                             2.31-0ubuntu9.9                    deb           
libc6-dev                         2.31-0ubuntu9.9                    deb           
libcap-ng0                        0.7.9-2.1build1                    deb           
libcap2                           1:2.32-1ubuntu0.1                  deb           
libcc1-0                          10.3.0-1ubuntu1~20.04              deb           
libcom-err2                       1.45.5-2ubuntu1.1                  deb           
libcroco3                         0.6.13-1                           deb           
libcrypt-dev                      1:4.4.10-10ubuntu4                 deb           
libcrypt1                         1:4.4.10-10ubuntu4                 deb           
libctf-nobfd0                     2.34-6ubuntu1.6                    deb           
libctf0                           2.34-6ubuntu1.6                    deb           
libcurl4                          7.68.0-1ubuntu2.18                 deb           
libdb5.3                          5.3.28+dfsg1-0.6ubuntu2            deb           
libdbus-1-3                       1.12.16-2ubuntu2.3                 deb           
libdebconfclient0                 0.251ubuntu1                       deb           
libdebhelper-perl                 12.10ubuntu1                       deb           
libdpkg-perl                      1.19.7ubuntu3.2                    deb           
libdw1                            0.176-1.1build1                    deb           
libelf1                           0.176-1.1build1                    deb           
libexpat1                         2.2.9-1ubuntu0.6                   deb           
libexpat1-dev                     2.2.9-1ubuntu0.6                   deb           
libext2fs2                        1.45.5-2ubuntu1.1                  deb           
libfakeroot                       1.24-1                             deb           
libfdisk1                         2.34-0.1ubuntu9.4                  deb           
libffi7                           3.3-4                              deb           
libfile-fcntllock-perl            0.22-3build4                       deb           
libfile-stripnondeterminism-perl  1.7.0-1                            deb           
libgcc-9-dev                      9.4.0-1ubuntu1~20.04.1             deb           
libgcc-s1                         10.3.0-1ubuntu1~20.04              deb           
libgcrypt20                       1.8.5-5ubuntu1.1                   deb           
libgdbm-compat4                   1.18.1-5                           deb           
libgdbm6                          1.18.1-5                           deb           
libglib2.0-0                      2.64.6-1~ubuntu20.04.6             deb           
libglib2.0-data                   2.64.6-1~ubuntu20.04.6             deb           
libgmp10                          2:6.2.0+dfsg-4ubuntu0.1            deb           
libgnutls30                       3.6.13-2ubuntu1.8                  deb           
libgomp1                          10.3.0-1ubuntu1~20.04              deb           
libgpg-error0                     1.37-1                             deb           
libgssapi-krb5-2                  1.17-6ubuntu4.3                    deb           
libgssapi3-heimdal                7.7.0+dfsg-1ubuntu1.4              deb           
libhcrypto4-heimdal               7.7.0+dfsg-1ubuntu1.4              deb           
libheimbase1-heimdal              7.7.0+dfsg-1ubuntu1.4              deb           
libheimntlm0-heimdal              7.7.0+dfsg-1ubuntu1.4              deb           
libhogweed5                       3.5.1+really3.5.1-2ubuntu0.2       deb           
libhx509-5-heimdal                7.7.0+dfsg-1ubuntu1.4              deb           
libicu66                          66.1-2ubuntu2.1                    deb           
libidn2-0                         2.2.0-2                            deb           
libintl                                                              java-archive  
libisl22                          0.22.1-1                           deb           
libitm1                           10.3.0-1ubuntu1~20.04              deb           
libk5crypto3                      1.17-6ubuntu4.3                    deb           
libkeyutils1                      1.6-6ubuntu1.1                     deb           
libkrb5-26-heimdal                7.7.0+dfsg-1ubuntu1.4              deb           
libkrb5-3                         1.17-6ubuntu4.3                    deb           
libkrb5support0                   1.17-6ubuntu4.3                    deb           
libksba8                          1.3.5-2ubuntu0.20.04.2             deb           
libldap-2.4-2                     2.4.49+dfsg-2ubuntu1.9             deb           
libldap-common                    2.4.49+dfsg-2ubuntu1.9             deb           
liblocale-gettext-perl            1.07-4                             deb           
liblsan0                          10.3.0-1ubuntu1~20.04              deb           
libltdl-dev                       2.4.6-14                           deb           
libltdl7                          2.4.6-14                           deb           
liblua5.2-0                       5.2.4-1.1build3                    deb           
liblz4-1                          1.9.2-2ubuntu0.20.04.1             deb           
liblzma5                          5.2.4-1ubuntu1.1                   deb           
libmagic-mgc                      1:5.38-4                           deb           
libmagic1                         1:5.38-4                           deb           
libmail-sendmail-perl             0.80-1                             deb           
libmount1                         2.34-0.1ubuntu9.4                  deb           
libmpc3                           1.1.0-1                            deb           
libmpdec2                         2.4.2-3                            deb           
libmpfr6                          4.0.2-1                            deb           
libncurses6                       6.2-0ubuntu2.1                     deb           
libncursesw6                      6.2-0ubuntu2.1                     deb           
libnettle7                        3.5.1+really3.5.1-2ubuntu0.2       deb           
libnghttp2-14                     1.40.0-1ubuntu0.1                  deb           
libnpth0                          1.6-1                              deb           
libnspr4                          2:4.25-1                           deb           
libnss3                           2:3.49.1-1ubuntu1.9                deb           
libp11-kit0                       0.23.20-1ubuntu0.1                 deb           
libpam-modules                    1.3.1-5ubuntu4.6                   deb           
libpam-modules-bin                1.3.1-5ubuntu4.6                   deb           
libpam-runtime                    1.3.1-5ubuntu4.6                   deb           
libpam0g                          1.3.1-5ubuntu4.6                   deb           
libpcre2-8-0                      10.34-7ubuntu0.1                   deb           
libpcre3                          2:8.39-12ubuntu0.1                 deb           
libperl5.30                       5.30.0-9ubuntu0.4                  deb           
libpipeline1                      1.5.2-2build1                      deb           
libpopt0                          1.16-14                            deb           
libprocps8                        2:3.3.16-1ubuntu2.3                deb           
libpsl5                           0.21.0-1ubuntu1                    deb           
libpython3-dev                    3.8.2-0ubuntu2                     deb           
libpython3-stdlib                 3.8.2-0ubuntu2                     deb           
libpython3.8                      3.8.10-0ubuntu1~20.04.8            deb           
libpython3.8-dev                  3.8.10-0ubuntu1~20.04.8            deb           
libpython3.8-minimal              3.8.10-0ubuntu1~20.04.8            deb           
libpython3.8-stdlib               3.8.10-0ubuntu1~20.04.8            deb           
libquadmath0                      10.3.0-1ubuntu1~20.04              deb           
libreadline8                      8.0-4                              deb           
libroken18-heimdal                7.7.0+dfsg-1ubuntu1.4              deb           
librpm8                           4.14.2.1+dfsg1-1build2             deb           
librpmbuild8                      4.14.2.1+dfsg1-1build2             deb           
librpmio8                         4.14.2.1+dfsg1-1build2             deb           
librpmsign8                       4.14.2.1+dfsg1-1build2             deb           
librtmp1                          2.4+20151223.gitfa8646d.1-2build1  deb           
libsasl2-2                        2.1.27+dfsg-2ubuntu0.1             deb           
libsasl2-modules                  2.1.27+dfsg-2ubuntu0.1             deb           
libsasl2-modules-db               2.1.27+dfsg-2ubuntu0.1             deb           
libseccomp2                       2.5.1-1ubuntu1~20.04.2             deb           
libselinux1                       3.0-1build2                        deb           
libsemanage-common                3.0-1build2                        deb           
libsemanage1                      3.0-1build2                        deb           
libsepol1                         3.0-1ubuntu0.1                     deb           
libsigsegv2                       2.12-2                             deb           
libsmartcols1                     2.34-0.1ubuntu9.4                  deb           
libsqlite3-0                      3.31.1-4ubuntu0.5                  deb           
libss2                            1.45.5-2ubuntu1.1                  deb           
libssh-4                          0.9.3-2ubuntu2.3                   deb           
libssl1.1                         1.1.1f-1ubuntu2.19                 deb           
libstdc++-9-dev                   9.4.0-1ubuntu1~20.04.1             deb           
libstdc++6                        10.3.0-1ubuntu1~20.04              deb           
libsub-override-perl              0.09-2                             deb           
libsys-hostname-long-perl         1.5-1                              deb           
libsystemd0                       245.4-4ubuntu3.22                  deb           
libtasn1-6                        4.16.0-2                           deb           
libtinfo6                         6.2-0ubuntu2.1                     deb           
libtool                           2.4.6-14                           deb           
libtsan0                          10.3.0-1ubuntu1~20.04              deb           
libubsan1                         10.3.0-1ubuntu1~20.04              deb           
libuchardet0                      0.0.6-3build1                      deb           
libudev1                          245.4-4ubuntu3.22                  deb           
libunistring2                     0.9.10-2                           deb           
libuuid1                          2.34-0.1ubuntu9.4                  deb           
libwind0-heimdal                  7.7.0+dfsg-1ubuntu1.4              deb           
libxml2                           2.9.10+dfsg-5ubuntu0.20.04.6       deb           
libzstd1                          1.4.4+dfsg-3ubuntu0.1              deb           
linux-libc-dev                    5.4.0-152.169                      deb           
login                             1:4.8.1-1ubuntu5.20.04.4           deb           
logsave                           1.45.5-2ubuntu1.1                  deb           
lsb-base                          11.1.0ubuntu2                      deb           
lz4                               3.1.3                              python        
m4                                1.4.18-4                           deb           
make                              4.2.1-1.2                          deb           
man-db                            2.9.1-1                            deb           
manpages                          5.05-1                             deb           
manpages-dev                      5.05-1                             deb           
mawk                              1.3.4.20200120-2                   deb           
mime-support                      3.64ubuntu1                        deb           
mkl-fft                           1.3.1                              python        
mkl-random                        1.2.2                              python        
mkl-service                       2.4.0                              python        
mock                              4.0.3                              python        
mount                             2.34-0.1ubuntu9.4                  deb           
ncurses-base                      6.2-0ubuntu2.1                     deb           
ncurses-bin                       6.2-0ubuntu2.1                     deb           
netbase                           6.1                                deb           
numexpr                           2.8.1                              python        
numpy                             1.21.2                             python        
numpy                             1.24.3                             python        
openssl                           1.1.1f-1ubuntu2.19                 deb           
packaging                         21.3                               python        
pandas                            1.3.5                              python        
pandas                            2.0.2                              python        
passwd                            1:4.8.1-1ubuntu5.20.04.4           deb           
patch                             2.7.6-6                            deb           
patsy                             0.5.2                              python        
perl                              5.30.0-9ubuntu0.4                  deb           
perl-base                         5.30.0-9ubuntu0.4                  deb           
perl-modules-5.30                 5.30.0-9ubuntu0.4                  deb           
pinentry-curses                   1.1.0-3build1                      deb           
pip                               20.0.2                             python        
pip                               23.1.2                             python        
po-debconf                        1.0.21                             deb           
procps                            2:3.3.16-1ubuntu2.3                deb           
publicsuffix                      20200303.0012-1                    deb           
pycurl                            7.44.1                             python        
pyfaidx                           0.6.4                              python        
pyparsing                         3.0.4                              python        
pysam                             0.16.0.1                           python        
python                            3.8.10                             binary        
python                            3.8.12                             binary        
python-dateutil                   2.8.2                              python        
python-pip-whl                    20.0.2-5ubuntu1.9                  deb           
python3                           3.8.2-0ubuntu2                     deb           
python3-dev                       3.8.2-0ubuntu2                     deb           
python3-distutils                 3.8.10-0ubuntu1~20.04              deb           
python3-lib2to3                   3.8.10-0ubuntu1~20.04              deb           
python3-minimal                   3.8.2-0ubuntu2                     deb           
python3-pip                       20.0.2-5ubuntu1.9                  deb           
python3-pkg-resources             45.2.0-1ubuntu0.1                  deb           
python3-setuptools                45.2.0-1ubuntu0.1                  deb           
python3-wheel                     0.34.2-1ubuntu0.1                  deb           
python3.8                         3.8.10-0ubuntu1~20.04.8            deb           
python3.8-dev                     3.8.10-0ubuntu1~20.04.8            deb           
python3.8-minimal                 3.8.10-0ubuntu1~20.04.8            deb           
pytz                              2021.3                             python        
pytz                              2023.3                             python        
readline-common                   8.0-4                              deb           
rpm                               4.14.2.1+dfsg1-1build2             deb           
rpm-common                        4.14.2.1+dfsg1-1build2             deb           
rpm2cpio                          4.14.2.1+dfsg1-1build2             deb           
scikit-learn                      0.24.2                             python        
scipy                             1.7.3                              python        
sed                               4.7-1                              deb           
sensible-utils                    0.0.12+nmu1                        deb           
setuptools                        45.2.0                             python        
setuptools                        58.0.4                             python        
shared-mime-info                  1.15-1                             deb           
six                               1.16.0                             python        
statsmodels                       0.13.2                             python        
sysvinit-utils                    2.96-2.1ubuntu1                    deb           
tables                            3.6.1                              python        
tar                               1.30+dfsg-7ubuntu0.20.04.3         deb           
threadpoolctl                     2.2.0                              python        
tzdata                            2023.3                             python        
tzdata                            2023c-0ubuntu0.20.04.2             deb           
ubuntu-keyring                    2020.02.11.4                       deb           
util-linux                        2.34-0.1ubuntu9.4                  deb           
wheel                             0.34.2                             python        
xdg-user-dirs                     0.17-2ubuntu1                      deb           
xz-utils                          5.2.4-1ubuntu1.1                   deb           
zlib1g                            1:1.2.11.dfsg-2ubuntu1.5           deb           
zlib1g-dev                        1:1.2.11.dfsg-2ubuntu1.5           deb

@DriesSchaumont
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I am going to drop this here: https://github.com/microsoft/sbom-tool
which uses: https://github.com/microsoft/component-detection

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@rcannood @DriesSchaumont