Fixes necessary for somatic WGS to run #49
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tmooney
approved these changes
Jul 28, 2022
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+1, makes sense to me! I'm generally trusting that the workflow was run with these changes at some point.
As an aside, this from the sambamba markdup docs does help explain one of the changes here 🙂:
BUGS
External sort is not implemented. Thus, memory consumption grows by 2Gb per each 100M reads. Check that you have enough RAM before running the tool.
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