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DESCRIPTION
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Package: fgsea
Title: Fast Gene Set Enrichment Analysis
Version: 1.1.3.9000
Date: 2016-11-21
Authors@R: person("Alexey", "Sergushichev", email = "alsergbox@gmail.com", role = c("aut", "cre"))
Description: The package implements an algorithm for fast gene set enrichment
analysis. Using the fast algorithm allows to make more permutations and get
more fine grained p-values, which allows to use accurate stantard approaches to
multiple hypothesis correction.
biocViews: GeneExpression, DifferentialExpression, GeneSetEnrichment, Pathways
SystemRequirements: C++11
Depends:
R (>= 3.3),
Rcpp
Imports:
data.table,
BiocParallel,
stats,
ggplot2 (>= 2.2.0),
gridExtra,
grid,
fastmatch
Suggests:
testthat,
knitr,
rmarkdown,
reactome.db,
AnnotationDbi,
parallel
License: MIT + file LICENCE
LazyData: true
LinkingTo: Rcpp
RoxygenNote: 5.0.1
VignetteBuilder: knitr
URL: https://github.com/ctlab/fgsea/
BugReports: https://github.com/ctlab/fgsea/issues