diff --git a/vignettes/OverviewSlides.Rmd b/vignettes/OverviewSlides.Rmd index ab81053..14f8e71 100644 --- a/vignettes/OverviewSlides.Rmd +++ b/vignettes/OverviewSlides.Rmd @@ -207,15 +207,16 @@ system.time( ## Resource -1000 Genomes Project: [http://bochet.gcc.biostat.washington.edu/seqarray/1000genomes](http://bochet.gcc.biostat.washington.edu/seqarray/1000genomes) +[https://gds-stat.s3.amazonaws.com/download/1000g/index.html](https://gds-stat.s3.amazonaws.com/download/1000g/index.html) -1. Phase 1: - - [1KG_autosomes_SHAPEIT2_integrated_phase1_v3_20101123_snps_indels_svs_genotypes.seq.gds](http://bochet.gcc.biostat.washington.edu/seqarray/1000genomes/1KG_autosomes_SHAPEIT2_integrated_phase1_v3_20101123_snps_indels_svs_genotypes.seq.gds) [1.5G] - - 1,092 individuals and 38,219,238 variants +1000 Genomes Project Phase 3: -2. Phase 3: - - [1KG_autosomes_phase3_shapeit2_mvncall_integrated_v5_20130502_lzma.seq.gds](http://bochet.gcc.biostat.washington.edu/seqarray/1000genomes/1KG_autosomes_phase3_shapeit2_mvncall_integrated_v5_20130502_lzma.seq.gds) [2.4G] - - 2,504 individuals and 81,271,745 variants +- Autosomes (2.60GB, 2,504 individuals and 81,271,745 variants): + 1KG_ALL.autosome.phase3_shapeit2_mvncall_integrated_v5a.20130502.genotypes.gds +- Chromosome X (94.1MB, 2,504 individuals and 3,468,093 variants): + 1KG_ALL.chrX.phase3_shapeit2_mvncall_integrated_v1b.20130502.genotypes.gds +- Chromosome Y (2.70MB, 1,233 males and 62,042 variants): + 1KG_ALL.chrY.phase3_integrated_v2a.20130502.genotypes.gds ## Acknowledgements