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@hbctraining

Teaching materials at the Harvard Chan Bioinformatics Core

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  1. Intro-to-R-flipped Public

    R 81 44

  2. Shell-for-bioinformatics Public

    HTML 45 23

  3. Intro-to-scRNAseq Public

    R 580 194

  4. Intro-to-bulk-RNAseq Public

    Introduction to bulk RNA-seq

    HTML 106 42

  5. Intro-to-DGE Public

    HTML 192 83

  6. Investigating-chromatin-biology-ChIPseq Public

    HTML 89 38

Repositories

Showing 10 of 57 repositories
  • Tools-for-reproducible-research Public
    R 10 7 15 0 Updated Apr 16, 2025
  • Intro-to-scRNAseq Public
    R 580 194 8 0 Updated Apr 15, 2025
  • Training-modules Public

    Materials for short, half-day workshops

    Jupyter Notebook 325 151 18 3 Updated Apr 15, 2025
  • main Public template
    SCSS 53 17 0 1 Updated Apr 12, 2025
  • Investigating-chromatin-biology-ChIPseq Public
    HTML 89 CC0-1.0 38 8 0 Updated Apr 11, 2025
  • Intro-to-peak-analysis Public

    An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq

    Shell 22 CC0-1.0 5 8 0 Updated Apr 11, 2025
  • Pseudobulk-for-scRNAseq Public

    Approaches for looking at differential expression and differential abundance in scRNA-seq

    R 0 CC0-1.0 1 12 0 Updated Apr 11, 2025
  • collaborations Public

    Collaborations across campus

    SCSS 0 0 0 0 Updated Apr 3, 2025
  • Intro-to-bulk-RNAseq Public

    Introduction to bulk RNA-seq

    HTML 106 42 7 1 Updated Apr 2, 2025
  • Intro-to-DGE Public
    HTML 192 83 6 0 Updated Mar 21, 2025
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