Skip to content

Issues: mllg/batchtools

New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

#

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

83 Open 143 Closed
83 Open 143 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

loadRegistry assigns exported objects into the global namespace
#304 opened Dec 2, 2024 by sebffischer
1
Retry slurm-commands on error
#303 opened Oct 8, 2024 by mb706
Option to drop into 'recover' when running testJob throws an error
#302 opened Aug 21, 2024 by mb706
Old version of Slurm, "invalid job state specified: SI"
#300 opened Jan 15, 2024 by jacob-long
1
Creating jobs without package dependencies installed on head node
#298 opened Dec 18, 2023 by lpiep
Slurm resource named clusters in docs, and cluster in getClusters
#297 opened Oct 17, 2023 by jemus42
calling batchMap + submitJob in a loop triggers "Registry must be empty" error
#295 opened Jun 26, 2023 by MLopez-Ibanez
1
squeue cmd not found when running R targets on singularity docker image
#294 opened May 16, 2023 by ailtonpcf
1
Effectively use batchtools for Targets-based workflow in SLURM
#292 opened Jan 25, 2023 by stemangiola
4
Question: How are template files interpretted?
#291 opened Jan 25, 2023 by lpiep
1
Error in (function () : unused argument (x = 3)
#290 opened Jan 14, 2023 by pulidofabs
3
Make 'options(error = function(e) traceback(2))` optional in testJob
#289 opened Sep 27, 2022 by mb706
Edit the job template without clearing the entire registry
#288 opened Sep 23, 2022 by multimeric
Yet another BatchtoolsExpiration: Future ('<none>') expired error
#285 opened Apr 1, 2022 by kpj
makeClusterFunctions store.job.collection flag documentation
#284 opened Jan 30, 2022 by mb706
ability to suppress warning on failure to source source when calling makeRegistry
#281 opened Oct 7, 2021 by myoung3
Job requeue on Slurm - 'no such file or directory' & workaround
#280 opened Jul 24, 2021 by stuvet
1
scoping errors depending on objects in global environment
#275 opened Jun 15, 2021 by sumny
Error in readLog() on Slurm cluster
#273 opened May 26, 2021 by stuvet
12
Execution order of jobs in the same chunk
#272 opened Apr 9, 2021 by bommert
[Question] Dynamically change number of concurrent jobs
#270 opened Jan 31, 2021 by dipterix
Custom job submission command with TORQUE/PBS
#269 opened Jan 16, 2021 by qpmnguyen
segfault in batchExport
#266 opened Sep 29, 2020 by rimorob
btlapply submitting to only a small number of nodes in Slurm
#265 opened Aug 28, 2020 by yimyom
runOSCommand throws error with R 4.0 (missing shQuote)
#264 opened Jul 17, 2020 by aschersleben
2
ProTip! no:milestone will show everything without a milestone.