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Pull requests: nf-core/modules

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Pull requests list

Define a micromamba profile for tests
#8206 opened Apr 3, 2025 by Gullumluvl Loading…
1 of 17 tasks
1
Add sylphtax/merge module
#8203 opened Apr 3, 2025 by sofstam Loading…
17 tasks
7
DO NOT MERGE: Test new nf-core-bot action WIP Work in progress
#8199 opened Apr 3, 2025 by mashehu Loading…
5
ragtag/scaffold and ragtag/patch modules and tests
#8198 opened Apr 3, 2025 by nschan Loading…
Update linting action
#8191 opened Apr 2, 2025 by grst Loading…
1 of 17 tasks
6
✨ Add VueGen module files Ready for Review
#8190 opened Apr 2, 2025 by sayalaruano Loading…
11 of 17 tasks
1
@sayalaruano
3
Swap sentieon/tnhaplotypecaller2 to nf-test
#8187 opened Apr 1, 2025 by SPPearce • Draft
1
Fix: Quote shell parameters
#8177 opened Apr 1, 2025 by zeehio Loading…
1 of 17 tasks
1
Update biocontainers/busco Docker tag to v5.8.3
#8174 opened Apr 1, 2025 by renovate bot Loading…
2 tasks
Update dotnet monorepo
#8172 opened Apr 1, 2025 by renovate bot Loading…
2 tasks
@maxulysse @edmundmiller
Metaspace submit ready to merge
#8170 opened Mar 31, 2025 by Bisho2122 Loading…
11 of 17 tasks
1
@Bisho2122
9
Update vrhyme modules, including nf-test nf-test Ready for Review
#8163 opened Mar 30, 2025 by SPPearce Loading…
2
stub and nf-test created for raxmlng nf-test
#8161 opened Mar 29, 2025 by bhargava-morampalli Loading…
3 of 17 tasks
1
@bhargava-morampalli
17
update propd new genewise
#8154 opened Mar 28, 2025 by caraiz2001 Loading…
17 tasks
1
Add metabuli/build module
#8148 opened Mar 27, 2025 by pawelciurkaardigen Loading…
17 tasks
1
Migrate HLALA_TYPING to nf-test nf-test
#8147 opened Mar 27, 2025 by LouisLeNezet • Draft
17 tasks
1
@LouisLeNezet
5
Metaspace download Ready for Review
#8145 opened Mar 26, 2025 by Dewey-Wang Loading…
12 of 17 tasks
1
@Dewey-Wang
17
add ctatsplicing/prepgenomelib and ctatsplicing/startocancerintrons
#8144 opened Mar 26, 2025 by anoronh4 Loading…
13 of 17 tasks
1
🚀 first commit to add ARACNe3 module
#8143 opened Mar 26, 2025 by stikos • Draft
11 of 17 tasks
1
@stikos
1
🤹🏻 subworkflow for protein activity virtual estimation using aracne and viper
#8141 opened Mar 26, 2025 by juanesarango • Draft
7 of 17 tasks
1
add gcta/gsmr tool
#8140 opened Mar 26, 2025 by juliaapolonio Loading…
12 of 17 tasks
24
🚀 Merge new viper module
#8137 opened Mar 26, 2025 by ddomenico • Draft
11 of 17 tasks
1
nf-test migration: plink/indeppairwise
#8133 opened Mar 26, 2025 by mantisps Loading…
17 tasks
1
20
Update kraken2
#8130 opened Mar 26, 2025 by jaimeozaez Loading…
4 of 17 tasks
@jaimeozaez
Update clipseq module peka from version 1.0.0 to 1.0.2 draft
#8127 opened Mar 26, 2025 by neusmf Loading…
17 tasks
@CharlotteAnne
1
ProTip! What’s not been updated in a month: updated:<2025-03-03.