fix-ci

[antgonza]

The tests are failing because the tests files used to live in qp_klp/tests/data/ and sequence_processing_pipeline/tests/data but they were moved to src/[folder] so I decided to move them outside of src; this should help with duplicated folders/files. The steps done were:

1. mkdir tests
2. git mv src/qp_klp/tests/* tests/
3. git mv src/sequence_processing_pipeline/tests/data/seq_counts_logs tests/data/
4. git mv src/sequence_processing_pipeline/tests/data/tellseq_output/ tests/data/
5. git rm -r src/sequence_processing_pipeline/tests/data/configuration_profiles/
6. git mv src/sequence_processing_pipeline/tests/data/sample_run_directories/ tests/data/
7. git mv src/sequence_processing_pipeline/tests/data/211021_A00000_0000_SAMPLE/* tests/data/211021_A00000_0000_SAMPLE/
8. rmdir src/sequence_processing_pipeline/tests/data/211021_A00000_0000_SAMPLE/
9. git mv src/sequence_processing_pipeline/tests/data/* tests/data/
10. rmdir src/sequence_processing_pipeline/tests/data/
11. git mv src/sequence_processing_pipeline/tests/bin tests/
12. rmdir src/sequence_processing_pipeline/tests/
13. rmdir src/qp_klp/tests/
14. git rm .//src/sequence_processing_pipeline/configuration.json

[AmandaBirmingham]

I am good with these changes. Out of curiosity, why was it necessary to comment out cover-package?

[antgonza]

Thank you @AmandaBirmingham. To be honest, I can fully remember, I think the problem was that it was getting confused between packages; I'll try to figure it out.