updates for #59 cran re-submission

.github/workflows/R-CMD-check.yaml

@@ -1,17 +1,16 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches:
-      - main
+    branches: [main, master]
   pull_request:
-    branches:
-      - main
 
-name: R-CMD-check
+name: R-CMD-check.yaml
 
-jobs:
+permissions: read-all
 
+jobs:
   R-CMD-check:
-
     runs-on: ${{ matrix.config.os }}
 
     name: ${{ matrix.config.os }} (${{ matrix.config.r }})
@@ -20,19 +19,17 @@ jobs:
       fail-fast: false
       matrix:
         config:
-          - {os: macOS-latest,   r: 'release'}
+          - {os: macos-latest,   r: 'release'}
           - {os: windows-latest, r: 'release'}
           - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
           - {os: ubuntu-latest,   r: 'release'}
           - {os: ubuntu-latest,   r: 'oldrel-1'}
 
     env:
-      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
-      R_KEEP_PKG_SOURCE: yes
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
 
     steps:
-
       - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-pandoc@v2
@@ -49,3 +46,6 @@ jobs:
           needs: check
 
       - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+          build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'

.github/workflows/test-coverage.yaml

@@ -1,26 +1,21 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches:
-      - main
+    branches: [main, master]
   pull_request:
-    branches:
-      - main
 
-name: test-coverage
+name: test-coverage.yaml
 
-jobs:
+permissions: read-all
 
+jobs:
   test-coverage:
-
-
     runs-on: ubuntu-latest
-
     env:
-      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-
       - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-r@v2
@@ -29,9 +24,38 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          extra-packages: any::covr
+          extra-packages: any::covr, any::xml2
           needs: coverage
 
       - name: Test coverage
-        run: covr::codecov()
+        run: |
+          cov <- covr::package_coverage(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
+          covr::to_cobertura(cov)
         shell: Rscript {0}
+
+      - uses: codecov/codecov-action@v4
+        with:
+          # Fail if error if not on PR, or if on PR and token is given
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}
+
+      - name: Show testthat output
+        if: always()
+        run: |
+          ## --------------------------------------------------------------------
+          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
+        shell: bash
+
+      - name: Upload test results
+        if: failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-test-failures
+          path: ${{ runner.temp }}/package

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: osmplotr
 Title: Bespoke Images of 'OpenStreetMap' Data
-Version: 0.3.5.009
+Version: 0.3.5.018
 Authors@R: 
     c(person(given = "Mark",
              family = "Padgham",
@@ -48,4 +48,4 @@ VignetteBuilder:
     knitr
 Encoding: UTF-8
 LazyData: true
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2

R/add-osm-surface.R

@@ -66,9 +66,9 @@
 #'     y = as.vector (t (array (y, dim = c (n, n)))),
 #'     z = x * y
 #' )
-#' \dontrun{
 #' map <- osm_basemap (bbox = bbox, bg = "gray20")
 #' map <- add_osm_surface (map, dat_B, dat = dat, cols = heat.colors (30))
+#' \donttest{
 #' print_osm_map (map)
 #' }
 #'
@@ -77,7 +77,6 @@
 #' # 'dat':
 #' d <- sqrt ((dat$x - mean (dat$x))^2 + (dat$y - mean (dat$y))^2)
 #' dat <- dat [which (d < 0.01), ]
-#' \dontrun{
 #' map <- osm_basemap (bbox = bbox, bg = "gray20")
 #' map <- add_osm_surface (
 #'     map,
@@ -86,6 +85,7 @@
 #'     cols = heat.colors (30),
 #'     bg = "gray40"
 #' )
+#' \donttest{
 #' print_osm_map (map)
 #' }
 #'
@@ -97,7 +97,6 @@
 #' # These data are also provided in
 #' dat_HP <- london$dat_HP
 #' cols <- adjust_colours (heat.colors (30), adj = -0.2) # darken by 20%
-#' \dontrun{
 #' map <- add_osm_surface (
 #'     map,
 #'     dat_HP,
@@ -106,14 +105,14 @@
 #'     bg = "gray60",
 #'     size = c (1.5, 0.5)
 #' )
+#' \donttest{
 #' print_osm_map (map)
 #' }
 #'
 #' # Adding multiple surfaces of either polygons or (lines/points) produces a
 #' # 'ggplot2' warning, and forces the colour gradient to revert to the last
 #' # given value.
 #' dat_T <- london$dat_T # trees
-#' \dontrun{
 #' map <- osm_basemap (bbox = bbox, bg = "gray20")
 #' map <- add_osm_surface (
 #'     map,
@@ -139,11 +138,11 @@
 #'     size = c (5, 2),
 #'     shape = c (8, 1)
 #' )
+#' \donttest{
 #' print_osm_map (map) # 'dat_HP' is in 'topo.colors' not 'heat.colors'
 #' }
 #'
 #' # Add axes and colourbar
-#' \dontrun{
 #' map <- add_axes (map)
 #' map <- add_colourbar (
 #'     map,
@@ -153,6 +152,7 @@
 #'     barlength = c (0.6, 0.99),
 #'     vertical = TRUE
 #' )
+#' \donttest{
 #' print_osm_map (map)
 #' }
 #' @family maps-with-data

R/connect-highways.R

@@ -31,17 +31,18 @@
 #'
 #' @examples
 #' bbox <- get_bbox (c (-0.13, 51.5, -0.11, 51.52))
-#' \dontrun{
 #' highways <- c (
 #'     "Monmouth.St", "Short.?s.Gardens", "Endell.St", "Long.Acre",
 #'     "Upper.Saint.Martin"
 #' )
 #' # Note that dots signify "anything", including whitespace and apostrophes,
 #' # and that '?' denotes optional previous character and so here matches
 #' # both "Shorts Gardens" and "Short's Gardens"
+#' \dontrun{
 #' highways1 <- connect_highways (highways = highways, bbox = bbox, plot = TRUE)
 #' highways <- c ("Endell.St", "High.Holborn", "Drury.Lane", "Long.Acre")
 #' highways2 <- connect_highways (highways = highways, bbox = bbox, plot = TRUE)
+#' }
 #'
 #' # Use of 'connect_highways' to highlight a region on a map
 #' map <- osm_basemap (bbox = bbox, bg = "gray20")
@@ -50,6 +51,7 @@
 #' #                            bbox = bbox)
 #' # Those data are part of 'osmplotr':
 #' dat_BNR <- london$dat_BNR # Non-residential buildings
+#' \dontrun{
 #' groups <- list (highways1, highways2)
 #' map <- add_osm_groups (map,
 #'     obj = dat_BNR, groups = groups,

R/extract-highways.R

@@ -71,7 +71,7 @@
 
 dl_hw_data <- function (highway_names, hw_abbrvs, bbox) {
 
-    cat ("Downloading OSM data ...\n")
+    message ("Downloading OSM data ...")
     p4s <- NULL
     lens_old <- length (highway_names)
     lens <- 0

R/make-osm-map.R

@@ -42,8 +42,8 @@
 #' dat <- make_osm_map (osm_data = london, structures = structs)
 #' # or download data automatically using a defined bounding boox
 #' bbox <- get_bbox (c (-0.15, 51.5, -0.10, 51.52))
-#' \dontrun{
 #' dat <- make_osm_map (bbox = bbox, structures = structs)
+#' \donttest{
 #' print_osm_map (dat$map)
 #' }
 #' @family construction
@@ -131,9 +131,9 @@ get_bbox_from_data <- function (osm_data) {
 
 get_missing_osm_data <- function (osm_data, structures, bbox, dat_prefix) {
 
-    cat (
-        "Downloading and extracting OSM data for",
-        nrow (structures), "structures ...\n"
+    message (
+        "Downloading and extracting OSM data for ",
+        nrow (structures), " structures ..."
     )
     pb <- txtProgressBar (max = 1, style = 3)
     t0 <- proc.time ()
@@ -163,7 +163,7 @@ get_missing_osm_data <- function (osm_data, structures, bbox, dat_prefix) {
         setTxtProgressBar (pb, i / nrow (structures))
     }
     close (pb)
-    cat ("That took ", (proc.time () - t0) [3], "s\n", sep = "")
+    message ("That took ", (proc.time () - t0) [3], "s\n", sep = "")
 
     list ("indx" = indx, "osm_data" = osm_data)
 }

R/osm-structures.R

@@ -24,9 +24,9 @@
 #' structures <- c ("highway", "park", "ameniiy", "tree")
 #' structs <- osm_structures (structures = structures, col_scheme = "light")
 #' # make_osm_map returns potentially modified list of data
-#' \dontrun{
 #' dat <- make_osm_map (osm_data = london, structures = structs)
 #' # map contains updated $osm_data and actual map in $map
+#' \donttest{
 #' print_osm_map (dat$map)
 #' }
 #' @family construction

R/print-osm-map.R

@@ -3,7 +3,7 @@
 #' Prints an OSM map produced with \code{osmplotr} to a specified graphics
 #' device.
 #'
-#' @param map The map to be printed; a \code{ggplot2} object produced by
+#' @param map The map to be printed; a \pkg{ggplot2} object produced by
 #' \code{osmplotr}.
 #' @param width Desired width of graphics device.
 #' @param height Desired height of graphics device. Ignored if width specified.
@@ -12,6 +12,7 @@
 #' not explicitly provided).
 #' @param units Units for height and width of graphics device.
 #' @param dpi Resolution of graphics device (dots-per-inch).
+#' @return (Invisibly) the \pkg{ggplot2} map object.
 #'
 #' @seealso \code{\link{osm_basemap}}, \code{\link{add_osm_objects}},
 #' \code{\link{make_osm_map}}.
@@ -21,8 +22,9 @@
 #' map <- osm_basemap (bbox = bbox, bg = "gray20")
 #' map <- add_osm_objects (map, london$dat_BNR, col = "gray40")
 #' print_osm_map (map, width = 7) # prints to screen device
-#' \dontrun{
+#' \donttest{
 #' print_osm_map (map, file = "map.png", width = 500, units = "px")
+#' file.remove ("map.png")
 #' }
 #' @family construction
 #' @export

codemeta.json

@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/ropensci/osmplotr",
   "issueTracker": "https://github.com/ropensci/osmplotr/issues",
   "license": "https://spdx.org/licenses/GPL-3.0",
-  "version": "0.3.5.009",
+  "version": "0.3.5.018",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",