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@tahiri-lab

tahiri-lab

Theoretical and Algorithmic Hybrid Interactive Reticulogram Interpretation (Tahiri)

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  1. aPhyloGeo aPhyloGeo Public

    aPhyloGeo is a multiplatform application for the analysis of genetic and climatic conditions.

    Python 10 8

  2. aPhyloGeo-pipeline aPhyloGeo-pipeline Public

    Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree

    Python 8

  3. iPhyloGeo iPhyloGeo Public

    Python 2 3

  4. GPTree GPTree Public

    This generator can be used to generate a specified number of phylogenetic trees (or clusters of trees in the cluster version) in Newick format with a variable number of leaves and with some level o…

    Jupyter Notebook 2

  5. phyDBSCAN phyDBSCAN Public

    phyDBSCAN: Building alternative phylogenetic trees using DBSCAN and Robinson and Foulds distance

    C++ 2

  6. ClonalTreeClustering ClonalTreeClustering Public

    B-cell lymphocyte clustering project

    C++ 2

Repositories

Showing 10 of 26 repositories
  • py_madaclim Public

    A simple Python API to interact with the Madaclim database

    Python 1 MIT 1 0 0 Updated Mar 15, 2025
  • iPhyloGeo_plus_plus Public
    Python 1 4 0 0 Updated Mar 13, 2025
  • aPhyloGeo Public

    aPhyloGeo is a multiplatform application for the analysis of genetic and climatic conditions.

    Python 10 8 2 0 Updated Feb 9, 2025
  • paralog-distance-trees Public
    Python 0 0 0 0 Updated Feb 7, 2025
  • ClonalTreeClustering Public

    B-cell lymphocyte clustering project

    C++ 2 0 0 0 Updated Jan 8, 2025
  • Cumacea_aPhyloGeo Public
    Python 0 0 0 0 Updated Dec 9, 2024
  • scipy_proceedings_2024 Public Forked from scipy-conference/scipy_proceedings

    Tools used to generate the SciPy conference proceedings

    Python 0 528 0 0 Updated Dec 6, 2024
  • PrimConsTree Public
    Jupyter Notebook 0 MIT 0 1 0 Updated Nov 26, 2024
  • KNCL Public

    A solution designed to complete 2 phylogenetic trees defined on different but mutually overlapping sets of taxa on the union of their taxa sets and compute the Branch Score Distance between the completed phylogenetic trees.

    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Nov 8, 2024
  • GPTree Public

    This generator can be used to generate a specified number of phylogenetic trees (or clusters of trees in the cluster version) in Newick format with a variable number of leaves and with some level of overlap between trees in clusters.

    Jupyter Notebook 2 MIT 0 0 1 Updated Sep 9, 2024
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