AndriiPovsten · AndriiPovsten · Mar 1, 2024 · Feb 29, 2024 · Feb 29, 2024
diff --git a/analyses/cms-open-data-ttbar/dask_demo.res → ...ducibility_REANA/Dask_tests/dask_demo.res b/analyses/cms-open-data-ttbar/dask_demo.res → ...ducibility_REANA/Dask_tests/dask_demo.res
diff --git a/analyses/cms-open-data-ttbar/reana-dask.yaml → ...cibility_REANA/Dask_tests/reana-dask.yaml b/analyses/cms-open-data-ttbar/reana-dask.yaml → ...cibility_REANA/Dask_tests/reana-dask.yaml
diff --git a/...ses/cms-open-data-ttbar/Dockerfile_merged → ...r/Reproducibility_REANA/Dockerfile_merged b/...ses/cms-open-data-ttbar/Dockerfile_merged → ...r/Reproducibility_REANA/Dockerfile_merged
diff --git a/analyses/cms-open-data-ttbar/Reproducibility_REANA/Dockerfile_root_certificates b/analyses/cms-open-data-ttbar/Reproducibility_REANA/Dockerfile_root_certificates
@@ -0,0 +1,9 @@
+FROM docker.io/povstenandrii/papermill:20231102a
+
+# Copy cerngridca.crt from the local directory to the container
+COPY /ca-certificates/cerngridca.crt  /usr/local/share/ca-certificates/cerngridca.crt
+COPY /ca-certificates/cernroot.crt /usr/local/share/ca-certificates/cernroot.crt
+
+#RUN apk --no-cache add ca-certificates
+
+RUN update-ca-certificates
diff --git a/...ses/cms-open-data-ttbar/reana-yadage.yaml → ...No_paralelisation_REANA/reana-yadage.yaml b/...ses/cms-open-data-ttbar/reana-yadage.yaml → ...No_paralelisation_REANA/reana-yadage.yaml
diff --git a/analyses/cms-open-data-ttbar/reana.yaml → ..._REANA/No_paralelisation_REANA/reana.yaml b/analyses/cms-open-data-ttbar/reana.yaml → ..._REANA/No_paralelisation_REANA/reana.yaml
diff --git a/...ses/cms-open-data-ttbar/reana_2steps.yaml → ...No_paralelisation_REANA/reana_2steps.yaml b/...ses/cms-open-data-ttbar/reana_2steps.yaml → ...No_paralelisation_REANA/reana_2steps.yaml
diff --git a/analyses/cms-open-data-ttbar/steps.yaml → ..._REANA/No_paralelisation_REANA/steps.yaml b/analyses/cms-open-data-ttbar/steps.yaml → ..._REANA/No_paralelisation_REANA/steps.yaml
diff --git a/analyses/cms-open-data-ttbar/yadage.yaml → ...REANA/No_paralelisation_REANA/yadage.yaml b/analyses/cms-open-data-ttbar/yadage.yaml → ...REANA/No_paralelisation_REANA/yadage.yaml
diff --git a/analyses/cms-open-data-ttbar/Snakefile → ...ata-ttbar/Reproducibility_REANA/Snakefile b/analyses/cms-open-data-ttbar/Snakefile → ...ata-ttbar/Reproducibility_REANA/Snakefile
@@ -1,6 +1,5 @@
 N_FILES_MAX_PER_SAMPLE = 1
 download_sleep = 10
-#url_prefix = "https://xrootd-local.unl.edu:1094//"
 url_prefix = "https://eospublichttp.cern.ch//eos/opendata"
 
 import glob

diff --git a/analyses/cms-open-data-ttbar/Snakefile1 → ...ta-ttbar/Reproducibility_REANA/Snakefile1 b/analyses/cms-open-data-ttbar/Snakefile1 → ...ta-ttbar/Reproducibility_REANA/Snakefile1
diff --git a/analyses/cms-open-data-ttbar/Reproducibility_REANA/ca-certificates/cerngridca.crt b/analyses/cms-open-data-ttbar/Reproducibility_REANA/ca-certificates/cerngridca.crt
@@ -0,0 +1,54 @@
+-----BEGIN CERTIFICATE-----
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+-----END CERTIFICATE-----
diff --git a/analyses/cms-open-data-ttbar/Reproducibility_REANA/ca-certificates/cernroot.crt b/analyses/cms-open-data-ttbar/Reproducibility_REANA/ca-certificates/cernroot.crt
@@ -0,0 +1,38 @@
+-----BEGIN CERTIFICATE-----
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+-----END CERTIFICATE-----
diff --git a/...ses/cms-open-data-ttbar/cleaner_snakefile → ...r/Reproducibility_REANA/cleaner_snakefile b/...ses/cms-open-data-ttbar/cleaner_snakefile → ...r/Reproducibility_REANA/cleaner_snakefile
diff --git a/analyses/cms-open-data-ttbar/dask_demo.py → ...-ttbar/Reproducibility_REANA/dask_demo.py b/analyses/cms-open-data-ttbar/dask_demo.py → ...-ttbar/Reproducibility_REANA/dask_demo.py
diff --git a/analyses/cms-open-data-ttbar/entrypoint.sh → ...ttbar/Reproducibility_REANA/entrypoint.sh b/analyses/cms-open-data-ttbar/entrypoint.sh → ...ttbar/Reproducibility_REANA/entrypoint.sh
diff --git a/...es/cms-open-data-ttbar/file_merging.ipynb → .../Reproducibility_REANA/file_merging.ipynb b/...es/cms-open-data-ttbar/file_merging.ipynb → .../Reproducibility_REANA/file_merging.ipynb
diff --git a/...s/cms-open-data-ttbar/final_merging.ipynb → ...Reproducibility_REANA/final_merging.ipynb b/...s/cms-open-data-ttbar/final_merging.ipynb → ...Reproducibility_REANA/final_merging.ipynb
diff --git a/analyses/cms-open-data-ttbar/fix-env.sh → ...ta-ttbar/Reproducibility_REANA/fix-env.sh b/analyses/cms-open-data-ttbar/fix-env.sh → ...ta-ttbar/Reproducibility_REANA/fix-env.sh
diff --git a/analyses/cms-open-data-ttbar/merged.ipynb → ...-ttbar/Reproducibility_REANA/merged.ipynb b/analyses/cms-open-data-ttbar/merged.ipynb → ...-ttbar/Reproducibility_REANA/merged.ipynb
diff --git a/...ms-open-data-ttbar/models/model_even.json → ...roducibility_REANA/models/model_even.json b/...ms-open-data-ttbar/models/model_even.json → ...roducibility_REANA/models/model_even.json
diff --git a/...cms-open-data-ttbar/models/model_odd.json → ...producibility_REANA/models/model_odd.json b/...cms-open-data-ttbar/models/model_odd.json → ...producibility_REANA/models/model_odd.json
diff --git a/...s/cms-open-data-ttbar/nanoaod_inputs.json → ...Reproducibility_REANA/nanoaod_inputs.json b/...s/cms-open-data-ttbar/nanoaod_inputs.json → ...Reproducibility_REANA/nanoaod_inputs.json
diff --git a/.../cms-open-data-ttbar/prepare_workspace.py → ...eproducibility_REANA/prepare_workspace.py b/.../cms-open-data-ttbar/prepare_workspace.py → ...eproducibility_REANA/prepare_workspace.py
diff --git a/.../cms-open-data-ttbar/reana-snakemake.yaml → ...eproducibility_REANA/reana-snakemake.yaml b/.../cms-open-data-ttbar/reana-snakemake.yaml → ...eproducibility_REANA/reana-snakemake.yaml
diff --git a/...eference/histos_100_file_per_process.json → ...eference/histos_100_file_per_process.json b/...eference/histos_100_file_per_process.json → ...eference/histos_100_file_per_process.json
diff --git a/...reference/histos_10_file_per_process.json → ...reference/histos_10_file_per_process.json b/...reference/histos_10_file_per_process.json → ...reference/histos_10_file_per_process.json
diff --git a/.../reference/histos_1_file_per_process.json → .../reference/histos_1_file_per_process.json b/.../reference/histos_1_file_per_process.json → .../reference/histos_1_file_per_process.json
diff --git a/...eference/histos_200_file_per_process.json → ...eference/histos_200_file_per_process.json b/...eference/histos_200_file_per_process.json → ...eference/histos_200_file_per_process.json
diff --git a/...reference/histos_20_file_per_process.json → ...reference/histos_20_file_per_process.json b/...reference/histos_20_file_per_process.json → ...reference/histos_20_file_per_process.json
diff --git a/.../reference/histos_2_file_per_process.json → .../reference/histos_2_file_per_process.json b/.../reference/histos_2_file_per_process.json → .../reference/histos_2_file_per_process.json
diff --git a/...reference/histos_50_file_per_process.json → ...reference/histos_50_file_per_process.json b/...reference/histos_50_file_per_process.json → ...reference/histos_50_file_per_process.json
diff --git a/.../reference/histos_5_file_per_process.json → .../reference/histos_5_file_per_process.json b/.../reference/histos_5_file_per_process.json → .../reference/histos_5_file_per_process.json
diff --git a/...eference/histos_all_file_per_process.json → ...eference/histos_all_file_per_process.json b/...eference/histos_all_file_per_process.json → ...eference/histos_all_file_per_process.json
diff --git a/analyses/cms-open-data-ttbar/samples.txt → ...a-ttbar/Reproducibility_REANA/samples.txt b/analyses/cms-open-data-ttbar/samples.txt → ...a-ttbar/Reproducibility_REANA/samples.txt
diff --git a/...pen-data-ttbar/ttbar_analysis_reana.ipynb → ...cibility_REANA/ttbar_analysis_reana.ipynb b/...pen-data-ttbar/ttbar_analysis_reana.ipynb → ...cibility_REANA/ttbar_analysis_reana.ipynb
diff --git a/...ses/cms-open-data-ttbar/utils/__init__.py → ...r/Reproducibility_REANA/utils/__init__.py b/...ses/cms-open-data-ttbar/utils/__init__.py → ...r/Reproducibility_REANA/utils/__init__.py
diff --git a/...yses/cms-open-data-ttbar/utils/clients.py → ...ar/Reproducibility_REANA/utils/clients.py b/...yses/cms-open-data-ttbar/utils/clients.py → ...ar/Reproducibility_REANA/utils/clients.py
diff --git a/analyses/cms-open-data-ttbar/utils/config.py → ...bar/Reproducibility_REANA/utils/config.py b/analyses/cms-open-data-ttbar/utils/config.py → ...bar/Reproducibility_REANA/utils/config.py
diff --git a/...-open-data-ttbar/utils/config_training.py → ...ducibility_REANA/utils/config_training.py b/...-open-data-ttbar/utils/config_training.py → ...ducibility_REANA/utils/config_training.py
diff --git a/...s/cms-open-data-ttbar/utils/ecosystem.png → ...Reproducibility_REANA/utils/ecosystem.png b/...s/cms-open-data-ttbar/utils/ecosystem.png → ...Reproducibility_REANA/utils/ecosystem.png
diff --git a/...s/cms-open-data-ttbar/utils/file_input.py → ...Reproducibility_REANA/utils/file_input.py b/...s/cms-open-data-ttbar/utils/file_input.py → ...Reproducibility_REANA/utils/file_input.py
diff --git a/.../cms-open-data-ttbar/utils/file_output.py → ...eproducibility_REANA/utils/file_output.py b/.../cms-open-data-ttbar/utils/file_output.py → ...eproducibility_REANA/utils/file_output.py
diff --git a/...open-data-ttbar/utils/jetcombinations.png → ...ucibility_REANA/utils/jetcombinations.png b/...open-data-ttbar/utils/jetcombinations.png → ...ucibility_REANA/utils/jetcombinations.png
diff --git a/...yses/cms-open-data-ttbar/utils/metrics.py → ...ar/Reproducibility_REANA/utils/metrics.py b/...yses/cms-open-data-ttbar/utils/metrics.py → ...ar/Reproducibility_REANA/utils/metrics.py
diff --git a/analyses/cms-open-data-ttbar/utils/ml.py → ...a-ttbar/Reproducibility_REANA/utils/ml.py b/analyses/cms-open-data-ttbar/utils/ml.py → ...a-ttbar/Reproducibility_REANA/utils/ml.py
diff --git a/...ses/cms-open-data-ttbar/utils/plotting.py → ...r/Reproducibility_REANA/utils/plotting.py b/...ses/cms-open-data-ttbar/utils/plotting.py → ...r/Reproducibility_REANA/utils/plotting.py
diff --git a/...data-ttbar/utils/processing_pipelines.png → ...lity_REANA/utils/processing_pipelines.png b/...data-ttbar/utils/processing_pipelines.png → ...lity_REANA/utils/processing_pipelines.png
diff --git a/...es/cms-open-data-ttbar/utils/rebinning.py → .../Reproducibility_REANA/utils/rebinning.py b/...es/cms-open-data-ttbar/utils/rebinning.py → .../Reproducibility_REANA/utils/rebinning.py
diff --git a/.../cms-open-data-ttbar/utils/systematics.py → ...eproducibility_REANA/utils/systematics.py b/.../cms-open-data-ttbar/utils/systematics.py → ...eproducibility_REANA/utils/systematics.py
diff --git a/...ms-open-data-ttbar/utils/ttbar_labels.png → ...roducibility_REANA/utils/ttbar_labels.png b/...ms-open-data-ttbar/utils/ttbar_labels.png → ...roducibility_REANA/utils/ttbar_labels.png
diff --git a/analyses/cms-open-data-ttbar/cabinetry_config.yml b/analyses/cms-open-data-ttbar/cabinetry_config.yml