The pipeline is to annotate avian genes in B10K project (Phase2). Link to paper and supplementary file 1.
Requirements: muscle, genewise, blast.
To run this pipeline, please refer to sample_work.sh.
Identification of orthologs based on synteny in B10K phase2
To run this pipeline, please refer to s1.step1-2.1.sh and s2.step2.2-6.sh.