Version 1.3.74

What's Changed

• Add tool to identify loci with high fraction of clipped reads by @bbimber in #318
• Bump docker/build-push-action from 5.3.0 to 6.0.0 by @dependabot in #322
• Bump docker/#-action from 3.1.0 to 3.2.0 by @dependabot in #319
• Switch genomic position calc to 64 bit long by @hextraza in #321
• Bump docker/build-push-action from 6.0.0 to 6.0.1 by @dependabot in #323

Full Changelog: 1.3.73...1.3.74

Version 1.3.73

What's Changed

• add _sort to DocValues by @hextraza in #317

Full Changelog: 1.3.72...1.3.73

Version 1.3.72

What's Changed

• Bump peaceiris/actions-gh-pages from 3.9.3 to 4.0.0 by @dependabot in #314
• Bump docker/setup-buildx-action from 3.2.0 to 3.3.0 by @dependabot in #315
• Update lucene version by @bbimber in #316

Full Changelog: 1.3.71...1.3.72

Version 1.3.71

What's Changed

• Add sort fields every time we doc.add a value by @bbimber in #305

Full Changelog: 1.3.70...1.3.71

Version 1.3.70

What's Changed

• Bump docker/setup-buildx-action from 3.0.0 to 3.1.0 by @dependabot in #307
• Bump docker/build-push-action from 5.1.0 to 5.2.0 by @dependabot in #308
• Bump softprops/action-gh-release from 1 to 2 by @dependabot in #309
• Bump docker/#-action from 3.0.0 to 3.1.0 by @dependabot in #310
• Bump docker/build-push-action from 5.2.0 to 5.3.0 by @dependabot in #312
• Bump docker/setup-buildx-action from 3.1.0 to 3.2.0 by @dependabot in #311

Full Changelog: 1.3.69...1.3.70

Version 1.3.69

What's Changed

• Update to GATK 4.5.0 by @bbimber in #306

Full Changelog: 1.3.68...1.3.69

Version 1.3.68

This is a patch release that attempts to fix an intermittent ConcurrentModificationException in SplitVcfBySamples

Version 1.3.67

What's Changed

• Remove duplicated variableSamples field by @bbimber in #304

Full Changelog: 1.3.66...1.3.67

Version 1.3.66

What's Changed

• Bump actions/cache from 3 to 4 by @dependabot in #302
• Add genomicPosition as SortedNumericDocValuesField by @bbimber in #303

Full Changelog: 1.3.65...1.3.66

Version 1.3.65

What's Changed

• Improve error reporting for VcfToLuceneIndexer by @bbimber in #300
• Correct test data for VcfToLuceneIndexer by @bbimber in #301

Full Changelog: 1.3.64...1.3.65