Version 1.3.84

What's Changed

• Improve SVType annotation and add testing by @bbimber in #369
• Reduce logging in Save10xBarcodes by @bbimber in #370

Full Changelog: 1.3.83...1.3.84

Version 1.3.83

What's Changed

• Add SVType annotation by @bbimber in #368

Full Changelog: 1.3.82...1.3.83

Version 1.3.82

What's Changed

• Bump docker/setup-buildx-action from 3.9.0 to 3.10.0 by @dependabot in #365
• Bump docker/setup-qemu-action from 3.4.0 to 3.5.0 by @dependabot in #364
• Bump docker/build-push-action from 6.13.0 to 6.15.0 by @dependabot in #363
• Bump docker/setup-qemu-action from 3.5.0 to 3.6.0 by @dependabot in #366
• Add Save10xBarcodes to store CB/UB combinations by @bbimber in #367

Full Changelog: 1.3.81...1.3.82

Version 1.3.81

What's Changed

• Update VariantConcordanceScore to exclude the input VCF from driving variants by @bbimber in #361
• Bump docker/setup-qemu-action from 3.3.0 to 3.4.0 by @dependabot in #360
• Bump docker/setup-buildx-action from 3.8.0 to 3.9.0 by @dependabot in #359

Full Changelog: 1.3.80...1.3.81

Version 1.3.80

What's Changed

• Bugfix to SplitVcfBySamples when original header lacks depth by @bbimber in #358

Full Changelog: 1.3.79...1.3.80

Version 1.3.79

What's Changed

• Bump docker/build-push-action from 6.9.0 to 6.10.0 by @dependabot in #350
• Update lucene version by @bbimber in #352
• Bump docker/setup-buildx-action from 3.7.1 to 3.8.0 by @dependabot in #351
• Bump docker/build-push-action from 6.10.0 to 6.13.0 by @dependabot in #356
• Bump docker/setup-qemu-action from 3.2.0 to 3.3.0 by @dependabot in #353
• Improve SplitVcfBySamples to correctly handle allele-specific annotations by @bbimber in #357

Full Changelog: 1.3.78...1.3.79

Version 1.3.78

What's Changed

• Allow AnnotateNovelSites to be run in a mode without a prior VCF by @bbimber in #348
• Minor code cleanup in AnnotateNovelSites by @bbimber in #349

Full Changelog: 1.3.77...1.3.78

Version 1.3.77

What's Changed

• Bump docker/setup-buildx-action from 3.5.0 to 3.6.0 by @dependabot in #338
• Bump docker/setup-buildx-action from 3.6.0 to 3.6.1 by @dependabot in #339
• Bump docker/build-push-action from 6.5.0 to 6.6.1 by @dependabot in #341
• Bump docker/build-push-action from 6.6.1 to 6.7.0 by @dependabot in #342
• Bump docker/build-push-action from 6.7.0 to 6.8.0 by @dependabot in #343
• Bump docker/build-push-action from 6.8.0 to 6.9.0 by @dependabot in #344
• Bump docker/setup-buildx-action from 3.6.1 to 3.7.0 by @dependabot in #345
• Bump docker/setup-buildx-action from 3.7.0 to 3.7.1 by @dependabot in #346
• Improvements to GenotypeConcordance annotation by @bbimber in #347

Full Changelog: 1.3.76...1.3.77

Version 1.3.76

What's Changed

• Ensure VariantContexts are sorted in MergeVcfsAndGenotypes by @bbimber in #337

Full Changelog: 1.3.75...1.3.76

Version 1.3.75

What's Changed

• Bump docker/build-push-action from 6.0.1 to 6.4.0 by @dependabot in #330
• Bump docker/setup-buildx-action from 3.3.0 to 3.4.0 by @dependabot in #329
• Bump docker/setup-qemu-action from 3.0.0 to 3.1.0 by @dependabot in #327
• Bump docker/build-push-action from 6.4.0 to 6.4.1 by @dependabot in #331
• Bump docker/setup-buildx-action from 3.4.0 to 3.5.0 by @dependabot in #332
• Bump docker/build-push-action from 6.4.1 to 6.5.0 by @dependabot in #333
• Bump docker/setup-qemu-action from 3.1.0 to 3.2.0 by @dependabot in #334
• Bump docker/#-action from 3.2.0 to 3.3.0 by @dependabot in #335
• Ensure VariantContexts are sorted in ExtendedMultiVariantWalkerGrouped by @bbimber in #336

Full Changelog: 1.3.74...1.3.75