Created ClinVar.pm #761
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Created ClinVar.pm #761
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Plugin to annotate variants using data from the ClinVar database.
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Hi @SAADAT-Abu, Thank you so much for taking the time to contribute to VEP! We truly value contributions from the community, as they help make our tool better for everyone. I noticed that the plugin you've implemented is quite similar to a feature we already provide. In VEP, you can integrate custom annotations from standard format files into your results using the --custom flag. VCF is one of the supported formats. We provide a specific example for integrating ClinVar VCF files, which you can read more about here: Do you think this existing custom flag could address the requirements of your use case? |
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Plugin to annotate variants using data from the ClinVar database.